myRT

myRT report for GCA_003885255.1_ASM388525v1

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Seq: RRUL01000009.1 (208512 bp)
Overview 1 RT 1: 38066-40178 bp Neighborhood of RT #1 [38066, 40237] PHA02517 InsE RVT-GII trans_reg_C Feature: gene Location: 38066-38272 bp Feature: domain Description: PHA02517 Location: 38069-38270 bp Feature: domain Description: PHA0251 7 Location: 38069-38270 bp Feature: gene Location: 38439-38648 bp Feature: domain Description: InsE Location: 38451-38637 bp Feature: domain Description: InsE Location: 38451 -38637 bp Feature: gene Location: 38830-39123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38959-39049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38959-39049 bp Feature: gene Location: 39296-39637 bp Feature: gene Location: 39935-40237 bp Feature: domain Description: trans_reg_C Location: 39983-40178 bp Feature: domain Description: trans_reg_C Location: 39983-401 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, trans_reg_C (cd00383)

Seq: RRUL01000005.1 (422002 bp)
Overview 1 RT 1: 314690-322783 bp Neighborhood of RT #1 [314690, 322783] Arm-DNA-bind_3 RVT-AbiP2 HTH_29 HTH_33 DDE_3 Feature: gene Location: 314690-315439 bp Feature: domain Description: Arm-DNA-bind_3 Location: 314720-314975 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31472 0-314975 bp Feature: gene Location: 315702-319559 bp Feature: gene Location: 319782-321320 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 320211-320667 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 32 02 11-32 0667 bp Feature: gene Location: 321422-322459 bp Feature: domain Description: HTH_29 Location: 321518-321689 bp Feature: domain Description: HTH_2 9 Location: 32 1518-32 1689 bp Feature: domain Description: HTH_33 Location: 321722-321884 bp Feature: domain Description: HTH_33 Location: 32 172 2 -32 1884 bp Feature: domain Description: DDE_3 Location: 321926-322355 bp Feature: domain Description: DDE_3 Location: 32 192 6-32 2 355 bp Feature: gene Location: 322493-322783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-AbiP2, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)