myRT

myRT report for GCA_003886325.1_ASM388632v1

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Seq: RRVR01000063.1 (2849 bp)
Overview 1 RT 1: 622-2602 bp Neighborhood of RT #1 [622, 2847] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 622-1026 bp Feature: domain Description: InsE Location: 652-988 bp Feature: domain Description: InsE Location: 652-988 bp Feature: gene Location: 1055-1411 bp Feature: domain Description: PHA02517 Location: 1058-1367 bp Feature: domain Description: PHA0251 7 Location: 1 058-1 367 bp Feature: gene Location: 1528-2847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1597-2329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 597-2329 bp Feature: domain Description: GIIM Note: maturase Location: 2404-2602 bp Feature: domain Description: GIIM Note: maturase Location: 2404-2602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: RRVR01000022.1 (69560 bp)
Overview 1 RT 1: 30314-32817 bp Neighborhood of RT #1 [30314, 32843] CbeA_antitoxin RVT-GII GIIM CbeA_antitoxin DUF987 Feature: gene Location: 30314-30508 bp Feature: domain Description: CbeA_antitoxin Location: 30434-30491 bp Feature: domain Description: CbeA_antitoxin Location: 30434-30491 bp Feature: gene Location: 30549-30899 bp Feature: gene Location: 30926-32167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31133-31790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31133-31790 bp Feature: domain Description: GIIM Note: maturase Location: 31871-32093 bp Feature: domain Description: GIIM Note: maturase Location: 31871-32 093 bp Feature: gene Location: 32204-32608 bp Feature: domain Description: CbeA_antitoxin Location: 32315-32561 bp Feature: domain Description: CbeA_antitoxin Location: 32 315-32 561 bp Feature: gene Location: 32622-32843 bp Feature: domain Description: DUF987 Location: 32625-32817 bp Feature: domain Description: DUF987 Location: 32 62 5-32 817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbeA_antitoxin (pfam06154), RVT-GII, GIIM (pfam08388), DUF987 (pfam06174)

Seq: RRVR01000009.1 (208087 bp)
Overview 1 RT 1: 29004-32986 bp Neighborhood of RT #1 [29004, 33012] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 29004-30035 bp Feature: domain Description: Asparaginase_2 Location: 29094-30027 bp Feature: domain Description: Asparaginase_2 Location: 29094-3 0027 bp Feature: gene Location: 30362-30511 bp Feature: gene Location: 30559-31005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30865-30967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0865-3 0967 bp Feature: gene Location: 31227-31598 bp Feature: gene Location: 31651-33012 bp Feature: domain Description: DcuC Location: 31654-32986 bp Feature: domain Description: DcuC Location: 3 1654-3 2986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)

Seq: RRVR01000020.1 (81734 bp)
Overview 1 RT 1: 14556-16845 bp Neighborhood of RT #1 [14556, 16904] PHA02517 InsE RVT-GII trans_reg_C Feature: gene Location: 14556-14963 bp Feature: domain Description: PHA02517 Location: 14628-14961 bp Feature: domain Description: PHA02517 Location: 14 628-14 961 bp Feature: gene Location: 15099-15308 bp Feature: domain Description: InsE Location: 15111-15285 bp Feature: domain Description: InsE Location: 15111-15285 bp Feature: gene Location: 15335-15790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15626-15716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15626-15716 bp Feature: gene Location: 15963-16304 bp Feature: gene Location: 16602-16904 bp Feature: domain Description: trans_reg_C Location: 16650-16845 bp Feature: domain Description: trans_reg_C Location: 16650-1684 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, trans_reg_C (cd00383)

Seq: RRVR01000010.1 (206731 bp)
Overview 1 RT 1: 137188-143463 bp Neighborhood of RT #1 [137188, 143567] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_integrase Feature: gene Location: 137188-138108 bp Feature: domain Description: AbiEii Location: 137230-137971 bp Feature: domain Description: AbiEii Location: 137230-137971 bp Feature: gene Location: 138095-138898 bp Feature: domain Description: AbiEi_3_N Location: 138128-138389 bp Feature: domain Description: AbiEi_3_N Location: 138128-138389 bp Feature: domain Description: AbiEi_3 Location: 138401-138857 bp Feature: domain Description: AbiEi_3 Location: 138401-13885 7 bp Feature: gene Location: 139193-142402 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 139721-140210 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 139721-140210 bp Feature: domain Description: nitrilase Location: 141716-142313 bp Feature: domain Description: nitrilase Location: 141716-142313 bp Feature: gene Location: 142748-143218 bp Feature: gene Location: 143301-143567 bp Feature: domain Description: Phage_integrase Location: 143367-143463 bp Feature: domain Description: Phage_integrase Location: 143367-143463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_integrase (pfam00589)

Seq: RRVR01000041.1 (21600 bp)
Overview 1 RT 1: 3-1077 bp Neighborhood of RT #1 [3, 1085] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: gene Location: 341-652 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: domain Description: PRK10173 Location: 344-56 3 bp Feature: gene Location: 636-1085 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Feature: domain Description: PRK10173 Location: 6 39-1077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: RRVR01000071.1 (1329 bp)
Overview 1 RT 1: 2-1328 bp Neighborhood of RT #1 [2, 1327] PHA02517 RVT-GII Feature: gene Location: 2-409 bp Feature: domain Description: PHA02517 Location: 5-344 bp Feature: domain Description: PHA02517 Location: 5-344 bp Feature: gene Location: 1001-1327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127 4-1328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII