myRT

myRT report for GCA_003886615.1_ASM388661v1

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Seq: RRVS01000002.1 (342168 bp)
Overview 1 RT 1: 61706-69406 bp Neighborhood of RT #1 [61706, 69543] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 61706-62959 bp Feature: domain Description: proA Location: 61733-62924 bp Feature: domain Description: proA Location: 61 733-62924 bp Feature: gene Location: 63513-63983 bp Feature: gene Location: 64329-67538 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 64857-65346 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 64857-65346 bp Feature: domain Description: nitrilase Location: 66852-67449 bp Feature: domain Description: nitrilase Location: 66852-67449 bp Feature: gene Location: 67833-68636 bp Feature: domain Description: AbiEi_3_N Location: 67866-68127 bp Feature: domain Description: AbiEi_3_N Location: 67866-681 27 bp Feature: domain Description: AbiEi_3 Location: 68139-68595 bp Feature: domain Description: AbiEi_3 Location: 681 39-68595 bp Feature: gene Location: 68623-69543 bp Feature: domain Description: AbiEii Location: 68665-69406 bp Feature: domain Description: AbiEii Location: 68665-69406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: RRVS01000016.1 (92469 bp)
Overview 1 RT 1: 9701-13683 bp Neighborhood of RT #1 [9701, 13709] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 9701-10732 bp Feature: domain Description: Asparaginase_2 Location: 9791-10724 bp Feature: domain Description: Asparaginase_2 Location: 9791-1072 4 bp Feature: gene Location: 11059-11208 bp Feature: gene Location: 11256-11702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11562-11664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11562 -11664 bp Feature: gene Location: 11924-12295 bp Feature: gene Location: 12348-13709 bp Feature: domain Description: DcuC Location: 12351-13683 bp Feature: domain Description: DcuC Location: 12 351-13683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)

Seq: RRVS01000064.1 (2849 bp)
Overview 1 RT 1: 3-2190 bp Neighborhood of RT #1 [3, 2228] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: gene Location: 1499-1795 bp Feature: domain Description: PHA02517 Location: 1502-1751 bp Feature: domain Description: PHA02517 Location: 1502-1751 bp Feature: gene Location: 1824-2228 bp Feature: domain Description: InsE Location: 1854-2190 bp Feature: domain Description: InsE Location: 1854-2190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: RRVS01000074.1 (1329 bp)
Overview 1 RT 1: 3-1263 bp Neighborhood of RT #1 [3, 1328] RVT-GII PHA02517 Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 921-1328 bp Feature: domain Description: PHA02517 Location: 924-1263 bp Feature: domain Description: PHA02517 Location: 924 -1263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: RRVS01000023.1 (69560 bp)
Overview 1 RT 1: 30314-32817 bp Neighborhood of RT #1 [30314, 32843] CbeA_antitoxin RVT-GII GIIM CbeA_antitoxin DUF987 Feature: gene Location: 30314-30508 bp Feature: domain Description: CbeA_antitoxin Location: 30434-30491 bp Feature: domain Description: CbeA_antitoxin Location: 30434-30491 bp Feature: gene Location: 30549-30899 bp Feature: gene Location: 30926-32167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31133-31790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31133-31790 bp Feature: domain Description: GIIM Note: maturase Location: 31871-32093 bp Feature: domain Description: GIIM Note: maturase Location: 31871-32093 bp Feature: gene Location: 32204-32608 bp Feature: domain Description: CbeA_antitoxin Location: 32315-32561 bp Feature: domain Description: CbeA_antitoxin Location: 32315 -325 61 bp Feature: gene Location: 32622-32843 bp Feature: domain Description: DUF987 Location: 32625-32817 bp Feature: domain Description: DUF987 Location: 32625 -32817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbeA_antitoxin (pfam06154), RVT-GII, GIIM (pfam08388), DUF987 (pfam06174)

Seq: RRVS01000022.1 (76876 bp)
Overview 1 RT 1: 9720-12009 bp Neighborhood of RT #1 [9720, 12068] PHA02517 InsE RVT-GII trans_reg_C Feature: gene Location: 9720-10127 bp Feature: domain Description: PHA02517 Location: 9792-10125 bp Feature: domain Description: PHA02517 Location: 9792-10125 bp Feature: gene Location: 10263-10472 bp Feature: domain Description: InsE Location: 10275-10449 bp Feature: domain Description: InsE Location: 10275-10449 bp Feature: gene Location: 10499-10954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10790-10880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10790-10880 bp Feature: gene Location: 11127-11468 bp Feature: gene Location: 11766-12068 bp Feature: domain Description: trans_reg_C Location: 11814-12009 bp Feature: domain Description: trans_reg_C Location: 11814-12009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, trans_reg_C (cd00383)

Seq: RRVS01000044.1 (21600 bp)
Overview 1 RT 1: 20516-21437 bp Neighborhood of RT #1 [20516, 21598] PRK10173 PRK10173 RVT-GII Feature: gene Location: 20516-20965 bp Feature: domain Description: PRK10173 Location: 20519-20957 bp Feature: domain Description: PRK1017 3 Location: 20519-20957 bp Feature: gene Location: 20949-21260 bp Feature: domain Description: PRK10173 Location: 20952-21171 bp Feature: domain Description: PRK1017 3 Location: 20952-2117 1 bp Feature: gene Location: 21299-21598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21368-21437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21368-21437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII