myRT

myRT report for GCA_003892345.1_ASM389234v1

Download annotations/find similar RTs

Seq: RRUE01000002.1 (1720554 bp)
Overview 1 RT 1: 913609-921358 bp Neighborhood of RT #1 [913609, 921363] COG4310 PRK06209 RVT-GII GIIM G1P_cyt_trans PRK10416 Feature: gene Location: 913609-914976 bp Feature: domain Description: COG4310 Location: 913684-914953 bp Feature: domain Description: COG431 0 Location: 91 3684-91 4953 bp Feature: gene Location: 915089-916444 bp Feature: domain Description: PRK06209 Location: 915155-916442 bp Feature: domain Description: PRK06209 Location: 91 51 55-91 6442 bp Feature: gene Location: 916744-917952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916909-917524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 6909-91 7524 bp Feature: domain Description: GIIM Note: maturase Location: 917584-917788 bp Feature: domain Description: GIIM Note: maturase Location: 91 7584-91 7788 bp Feature: gene Location: 918602-919495 bp Feature: domain Description: G1P_cyt_trans Location: 918731-919493 bp Feature: domain Description: G1 P_cyt_trans Location: 91 8731 -91 9493 bp Feature: gene Location: 919768-921363 bp Feature: domain Description: PRK10416 Location: 919774-921358 bp Feature: domain Description: PRK1 041 6 Location: 91 9774-921 358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RRUE01000001.1 (2068526 bp)
Overview 1 RT 1: 522123-529188 bp 2 RT 2: 1010748-1019286 bp 3 RT 3: 1151434-1158825 bp 4 RT 4: 1608889-1618663 bp 5 RT 5: 1850002-1857127 bp Neighborhood of RT #1 [522123, 529226] LptG_lptG Dps RVT-GII GIIM AAA_21 AAA_21 COG3177 Neighborhood of RT #2 [1010748, 1019348] DHDPS-like RVT-GII GIIM FixJ PAS PRK11360 PRK11360 Neighborhood of RT #3 [1151434, 1158825] RVT-GII GIIM Neighborhood of RT #4 [1608889, 1618663] chaperone_ClpB RVT-GII GIIM Neighborhood of RT #5 [1850002, 1857132] uvrC PgsA RVT-GII GIIM PolY_Pol_IV_kappa YdcH Feature: gene Location: 522123-523271 bp Feature: domain Description: LptG_lptG Location: 522135-523257 bp Feature: domain Description: LptG_lptG Location: 52 2 135-52 32 57 bp Feature: gene Location: 523966-524436 bp Feature: domain Description: Dps Location: 523975-524431 bp Feature: domain Description: Dps Location: 52 3975-52 4431 bp Feature: gene Location: 525101-526309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525266-525881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 52 66-52 5881 bp Feature: domain Description: GIIM Note: maturase Location: 525941-526145 bp Feature: domain Description: GIIM Note: maturase Location: 52 5941-52 6145 bp Feature: gene Location: 526842-528131 bp Feature: domain Description: AAA_21 Location: 526911-527148 bp Feature: domain Description: AAA_2 1 Location: 52 6911-52 7148 bp Feature: domain Description: AAA_21 Location: 527694-527928 bp Feature: domain Description: AAA_2 1 Location: 52 7694-52 792 8 bp Feature: gene Location: 528132-529226 bp Feature: domain Description: COG3177 Location: 528180-529188 bp Feature: domain Description: COG3177 Location: 52 8180-52 9188 bp Feature: gene Location: 1010748-1011917 bp Feature: domain Description: DHDPS-like Location: 1010997-1011849 bp Feature: domain Description: DHDPS-like Location: 1010997-1011849 bp Feature: gene Location: 1012375-1012533 bp Feature: gene Location: 1012963-1014171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1013128-1013743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101312 8-1013743 bp Feature: domain Description: GIIM Note: maturase Location: 1013803-1014007 bp Feature: domain Description: GIIM Note: maturase Location: 1013803-1014007 bp Feature: gene Location: 1015029-1015682 bp Feature: domain Description: FixJ Location: 1015080-1015662 bp Feature: domain Description: FixJ Location: 1015080-1015662 bp Feature: gene Location: 1016139-1019348 bp Feature: domain Description: PAS Location: 1017117-1017804 bp Feature: domain Description: PAS Location: 1017117-1017804 bp Feature: domain Description: PRK11360 Location: 1017807-1018224 bp Feature: domain Description: PRK11360 Location: 1017807-10182 2 4 bp Feature: domain Description: PRK11360 Location: 1018347-1019286 bp Feature: domain Description: PRK11360 Location: 1018347-10192 86 bp Feature: gene Location: 1151434-1152738 bp Feature: gene Location: 1153229-1155397 bp Feature: gene Location: 1155694-1156902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155859-1156474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155859-1156474 bp Feature: domain Description: GIIM Note: maturase Location: 1156534-1156738 bp Feature: domain Description: GIIM Note: maturase Location: 1156534-1156738 bp Feature: gene Location: 1157256-1157576 bp Feature: gene Location: 1157698-1158825 bp Feature: gene Location: 1608889-1611510 bp Feature: domain Description: chaperone_ClpB Location: 1608907-1611499 bp Feature: domain Description: chaperone_ClpB Location: 1608907-1611499 bp Feature: gene Location: 1612127-1614025 bp Feature: gene Location: 1614719-1615927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1614884-1615499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1614884-1615499 bp Feature: domain Description: GIIM Note: maturase Location: 1615559-1615763 bp Feature: domain Description: GIIM Note: maturase Location: 1615559-1615763 bp Feature: gene Location: 1616060-1616200 bp Feature: gene Location: 1616693-1618663 bp Feature: gene Location: 1850002-1852122 bp Feature: domain Description: uvrC Location: 1850260-1852105 bp Feature: domain Description: uvrC Location: 18502 60-1852 105 bp Feature: gene Location: 1852384-1852959 bp Feature: domain Description: PgsA Location: 1852390-1852948 bp Feature: domain Description: PgsA Location: 1852 390-1852 948 bp Feature: gene Location: 1853305-1854513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853470-1854085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853470-1854085 bp Feature: domain Description: GIIM Note: maturase Location: 1854145-1854349 bp Feature: domain Description: GIIM Note: maturase Location: 1854145-1854349 bp Feature: gene Location: 1855355-1856734 bp Feature: domain Description: PolY_Pol_IV_kappa Location: 1855421-1856579 bp Feature: domain Description: PolY_Pol_IV_kappa Location: 185542 1-1856579 bp Feature: gene Location: 1856770-1857132 bp Feature: domain Description: YdcH Location: 1856914-1857127 bp Feature: domain Description: YdcH Location: 1856914-185712 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT