myRT

myRT report for GCA_003892485.1_ASM389248v1

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Seq: RRWP01000003.1 (551271 bp)
Overview 1 RT 1: 26113-28225 bp Neighborhood of RT #1 [26113, 28284] PHA02517 InsE RVT-GII trans_reg_C Feature: gene Location: 26113-26319 bp Feature: domain Description: PHA02517 Location: 26116-26317 bp Feature: domain Description: PHA0251 7 Location: 261 1 6-2631 7 bp Feature: gene Location: 26486-26695 bp Feature: domain Description: InsE Location: 26498-26684 bp Feature: domain Description: InsE Location: 26498-26684 bp Feature: gene Location: 26877-27170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27006-27096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27006-27096 bp Feature: gene Location: 27343-27684 bp Feature: gene Location: 27982-28284 bp Feature: domain Description: trans_reg_C Location: 28030-28225 bp Feature: domain Description: trans_reg_C Location: 28030-28225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, trans_reg_C (cd00383)

Seq: RRWP01000007.1 (302429 bp)
Overview 1 RT 1: 293906-301999 bp Neighborhood of RT #1 [293906, 301999] Arm-DNA-bind_3 RVT-AbiP2 HTH_29 HTH_33 DDE_3 Feature: gene Location: 293906-294655 bp Feature: domain Description: Arm-DNA-bind_3 Location: 293936-294191 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 93936-2 94191 bp Feature: gene Location: 294918-298775 bp Feature: gene Location: 298998-300536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 299427-299883 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 9942 7-2 99883 bp Feature: gene Location: 300638-301675 bp Feature: domain Description: HTH_29 Location: 300734-300905 bp Feature: domain Description: HTH_2 9 Location: 300734-300905 bp Feature: domain Description: HTH_33 Location: 300938-301100 bp Feature: domain Description: HTH_33 Location: 300938-301100 bp Feature: domain Description: DDE_3 Location: 301142-301571 bp Feature: domain Description: DDE_3 Location: 301142 -301571 bp Feature: gene Location: 301709-301999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-AbiP2, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)