myRT

myRT report for GCA_003935945.1_ASM393594v1

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Seq: RSEV01000005.1 (788194 bp)
Overview 1 RT 1: 355476-364084 bp Neighborhood of RT #1 [355476, 364095] RVT-Retrons ADA MarR Feature: gene Location: 355476-358412 bp Feature: gene Location: 358412-360220 bp Feature: gene Location: 360217-361725 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 360853-361501 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 360853-361 501 bp Feature: gene Location: 362313-363305 bp Feature: domain Description: ADA Location: 362328-363297 bp Feature: domain Description: ADA Location: 362328-363297 bp Feature: gene Location: 363652-364095 bp Feature: domain Description: MarR Location: 363709-364084 bp Feature: domain Description: MarR Location: 363709-364084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ADA (cd01320), MarR (pfam01047)

Seq: RSEV01000003.1 (1311286 bp)
Overview 1 RT 1: 117269-124418 bp 2 RT 2: 1167119-1174717 bp Neighborhood of RT #1 [117269, 124420] PadR RVT-UG24 YdiU Neighborhood of RT #2 [1167119, 1174740] AraC_binding AraC RVT-GII HNHc mycofact_OYE_2 HTH_1 PBP2_GltC_like Feature: gene Location: 117269-117811 bp Feature: domain Description: PadR Location: 117293-117668 bp Feature: domain Description: PadR Location: 1172 93-117668 bp Feature: gene Location: 117888-118097 bp Feature: gene Location: 118513-121773 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 119020-119500 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 11902 0-119500 bp Feature: gene Location: 121763-122335 bp Feature: gene Location: 122945-124420 bp Feature: domain Description: YdiU Location: 122975-124418 bp Feature: domain Description: YdiU Location: 12 2 975-12 4418 bp Feature: gene Location: 1167119-1167262 bp Feature: gene Location: 1167330-1168364 bp Feature: domain Description: AraC_binding Location: 1167417-1167603 bp Feature: domain Description: AraC_binding Location: 1167417-1167603 bp Feature: domain Description: AraC Location: 1167873-1168188 bp Feature: domain Description: AraC Location: 1167873-1168188 bp Feature: gene Location: 1168735-1170546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1169053-1169749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1169053-1169749 bp Feature: domain Description: HNHc Note: nucleases Location: 1170298-1170436 bp Feature: domain Description: HNHc Note: nucleases Location: 11702 98-1170436 bp Feature: gene Location: 1171599-1173602 bp Feature: domain Description: mycofact_OYE_2 Location: 1171620-1173564 bp Feature: domain Description: mycofact_OYE_2 Location: 117162 0-1173564 bp Feature: gene Location: 1173847-1174740 bp Feature: domain Description: HTH_1 Location: 1173862-1174036 bp Feature: domain Description: HTH_1 Location: 1173862 -1174036 bp Feature: domain Description: PBP2_GltC_like Location: 1174129-1174717 bp Feature: domain Description: PBP2 _GltC_like Location: 117412 9-1174717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT-UG24, YdiU (COG0397), AraC_binding (pfam02311), AraC (COG2207), RVT-GII, HNHc (smart00507), mycofact_OYE_2 (TIGR03997), HTH_1 (pfam00126), PBP2_GltC_like (cd08434)