myRT

myRT report for GCA_003936435.1_ASM393643v1

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Seq: RHTZ01000059.1 (1974 bp)
Overview 1 RT 1: 71-1610 bp Neighborhood of RT #1 [71, 1610] RVT-GII GIIM Feature: gene Location: 71-1426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-989 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1247 bp Feature: domain Description: GIIM Note: maturase Location: 1 028-1 247 bp Feature: gene Location: 1479-1610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RHTZ01000037.1 (19116 bp)
Overview 1 RT 1: 12192-16104 bp Neighborhood of RT #1 [12192, 16104] Antirestrict DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 12192-12617 bp Feature: domain Description: Antirestrict Location: 12327-12615 bp Feature: domain Description: Antirestrict Location: 12 32 7-12 615 bp Feature: gene Location: 12664-13086 bp Feature: domain Description: DUF1380 Location: 12667-12964 bp Feature: domain Description: DUF1380 Location: 12 667-12 964 bp Feature: gene Location: 13588-15255 bp Feature: domain Description: RVT_N Location: 13636-13873 bp Feature: domain Description: RVT_N Location: 13636-13873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13924-14566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1392 4-14566 bp Feature: domain Description: GIIM Note: maturase Location: 14617-14851 bp Feature: domain Description: GIIM Note: maturase Location: 14617-14851 bp Feature: domain Description: HNHc Note: nucleases Location: 15061-15220 bp Feature: domain Description: HNHc Note: nucleases Location: 15061-152 2 0 bp Feature: gene Location: 15535-15717 bp Feature: gene Location: 15829-16104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: RHTZ01000003.1 (467106 bp)
Overview 1 RT 1: 219552-224435 bp Neighborhood of RT #1 [219552, 224437] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 219552-220817 bp Feature: domain Description: umuC Location: 219555-220815 bp Feature: domain Description: umuC Location: 219555-220815 bp Feature: gene Location: 221042-221230 bp Feature: gene Location: 221490-222398 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 221763-222219 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 221763 -222219 bp Feature: gene Location: 222599-223267 bp Feature: domain Description: PRK09951 Location: 222602-223265 bp Feature: domain Description: PRK09951 Location: 222602-223 265 bp Feature: gene Location: 223472-224437 bp Feature: domain Description: PRK15110 Location: 223475-224435 bp Feature: domain Description: PRK15110 Location: 223 475-22443 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)