myRT

myRT report for GCA_003937005.1_ASM393700v1

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Seq: RHTF01000003.1 (295094 bp)
Overview 1 RT 1: 114453-119754 bp Neighborhood of RT #1 [114453, 119759] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 114453-115418 bp Feature: domain Description: PRK15110 Location: 114456-115416 bp Feature: domain Description: PRK1 51 1 0 Location: 1 1 4456-1 1 541 6 bp Feature: gene Location: 115623-116291 bp Feature: domain Description: PRK09951 Location: 115626-116289 bp Feature: domain Description: PRK09951 Location: 1 1 5626-1 1 6289 bp Feature: gene Location: 116492-117400 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 116765-117221 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 1 6765-1 1 7221 bp Feature: gene Location: 118073-119338 bp Feature: domain Description: umuC Location: 118076-119336 bp Feature: domain Description: umuC Location: 1 1 8076-1 1 9336 bp Feature: gene Location: 119340-119759 bp Feature: domain Description: PRK10276 Location: 119343-119754 bp Feature: domain Description: PRK1 0276 Location: 1 1 9343-1 1 9754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: RHTF01000069.1 (1974 bp)
Overview 1 RT 1: 71-1610 bp Neighborhood of RT #1 [71, 1610] RVT-GII GIIM Feature: gene Location: 71-1426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-989 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1247 bp Feature: domain Description: GIIM Note: maturase Location: 102 8-12 47 bp Feature: gene Location: 1479-1610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RHTF01000046.1 (19230 bp)
Overview 1 RT 1: 12192-16104 bp Neighborhood of RT #1 [12192, 16104] Antirestrict DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 12192-12617 bp Feature: domain Description: Antirestrict Location: 12327-12615 bp Feature: domain Description: Antirestrict Location: 123 27-12615 bp Feature: gene Location: 12664-13086 bp Feature: domain Description: DUF1380 Location: 12667-12964 bp Feature: domain Description: DUF13 80 Location: 12667-12964 bp Feature: gene Location: 13588-15255 bp Feature: domain Description: RVT_N Location: 13636-13873 bp Feature: domain Description: RVT_N Location: 13 63 6-13 873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13924-14566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 924-14566 bp Feature: domain Description: GIIM Note: maturase Location: 14617-14851 bp Feature: domain Description: GIIM Note: maturase Location: 14617-14851 bp Feature: domain Description: HNHc Note: nucleases Location: 15061-15220 bp Feature: domain Description: HNHc Note: nucleases Location: 15061-15220 bp Feature: gene Location: 15535-15717 bp Feature: gene Location: 15829-16104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)