myRT

myRT report for GCA_003937025.1_ASM393702v1

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Seq: RHTM01000078.1 (1974 bp)
Overview 1 RT 1: 71-1610 bp Neighborhood of RT #1 [71, 1610] RVT-GII GIIM Feature: gene Location: 71-1426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-989 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1247 bp Feature: domain Description: GIIM Note: maturase Location: 1 028-1 247 bp Feature: gene Location: 1479-1610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RHTM01000007.1 (196926 bp)
Overview 1 RT 1: 104394-109277 bp Neighborhood of RT #1 [104394, 109279] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 104394-105659 bp Feature: domain Description: umuC Location: 104397-105657 bp Feature: domain Description: umuC Location: 104397-105657 bp Feature: gene Location: 105884-106072 bp Feature: gene Location: 106332-107240 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 106605-107061 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 106605-107061 bp Feature: gene Location: 107441-108109 bp Feature: domain Description: PRK09951 Location: 107444-108107 bp Feature: domain Description: PRK09951 Location: 107444-108107 bp Feature: gene Location: 108314-109279 bp Feature: domain Description: PRK15110 Location: 108317-109277 bp Feature: domain Description: PRK15110 Location: 108317-1092 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: RHTM01000055.1 (19200 bp)
Overview 1 RT 1: 12192-16104 bp Neighborhood of RT #1 [12192, 16104] Antirestrict DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 12192-12617 bp Feature: domain Description: Antirestrict Location: 12327-12615 bp Feature: domain Description: Antirestrict Location: 123 27-12615 bp Feature: gene Location: 12664-13086 bp Feature: domain Description: DUF1380 Location: 12667-12964 bp Feature: domain Description: DUF13 80 Location: 12667-12964 bp Feature: gene Location: 13588-15255 bp Feature: domain Description: RVT_N Location: 13636-13873 bp Feature: domain Description: RVT_N Location: 13 63 6-13 873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13924-14566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 924-14566 bp Feature: domain Description: GIIM Note: maturase Location: 14617-14851 bp Feature: domain Description: GIIM Note: maturase Location: 14617-14851 bp Feature: domain Description: HNHc Note: nucleases Location: 15061-15220 bp Feature: domain Description: HNHc Note: nucleases Location: 15061-15220 bp Feature: gene Location: 15535-15717 bp Feature: gene Location: 15829-16104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)