myRT

myRT report for GCA_003937245.1_ASM393724v1

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Seq: RHUF01000039.1 (19200 bp)
Overview 1 RT 1: 12192-16104 bp Neighborhood of RT #1 [12192, 16104] Antirestrict DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 12192-12617 bp Feature: domain Description: Antirestrict Location: 12327-12615 bp Feature: domain Description: Antirestrict Location: 1 2327-1 261 5 bp Feature: gene Location: 12664-13086 bp Feature: domain Description: DUF1380 Location: 12667-12964 bp Feature: domain Description: DUF1 380 Location: 1 2667-1 2964 bp Feature: gene Location: 13588-15255 bp Feature: domain Description: RVT_N Location: 13636-13873 bp Feature: domain Description: RVT_N Location: 1 3636-1 3873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13924-14566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3924-1 4566 bp Feature: domain Description: GIIM Note: maturase Location: 14617-14851 bp Feature: domain Description: GIIM Note: maturase Location: 1 461 7-1 4851 bp Feature: domain Description: HNHc Note: nucleases Location: 15061-15220 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5061 -1 5220 bp Feature: gene Location: 15535-15717 bp Feature: gene Location: 15829-16104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: RHUF01000007.1 (250316 bp)
Overview 1 RT 1: 43305-48188 bp Neighborhood of RT #1 [43305, 48190] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 43305-44570 bp Feature: domain Description: umuC Location: 43308-44568 bp Feature: domain Description: umuC Location: 43308-44568 bp Feature: gene Location: 44795-44983 bp Feature: gene Location: 45243-46151 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 45516-45972 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 45516-45972 bp Feature: gene Location: 46352-47020 bp Feature: domain Description: PRK09951 Location: 46355-47018 bp Feature: domain Description: PRK09951 Location: 46355-47018 bp Feature: gene Location: 47225-48190 bp Feature: domain Description: PRK15110 Location: 47228-48188 bp Feature: domain Description: PRK15110 Location: 472 2 8-48188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: RHUF01000063.1 (1974 bp)
Overview 1 RT 1: 71-1610 bp Neighborhood of RT #1 [71, 1610] RVT-GII GIIM Feature: gene Location: 71-1426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 65-989 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1247 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1247 bp Feature: gene Location: 1479-1610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)