myRT

myRT report for GCA_003937635.1_ASM393763v1

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Seq: RHWK01000129.1 (3552 bp)
Overview 1 RT 1: 41-3520 bp Neighborhood of RT #1 [41, 3549] RVT-AbiP2 HsdM Rve Feature: gene Location: 41-1516 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: gene Location: 1854-3332 bp Feature: domain Description: HsdM Location: 1875-3300 bp Feature: domain Description: HsdM Location: 1 875-3300 bp Feature: gene Location: 3355-3549 bp Feature: domain Description: Rve Location: 3358-3520 bp Feature: domain Description: Rve Location: 3358-3520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: RHWK01000142.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RHWK01000013.1 (48882 bp)
Overview 1 RT 1: 44323-48664 bp Neighborhood of RT #1 [44323, 48708] HTH_XRE RVT-AbiP2 COG2865 Feature: gene Location: 44323-45096 bp Feature: gene Location: 45210-45446 bp Feature: domain Description: HTH_XRE Location: 45252-45438 bp Feature: domain Description: HTH_XRE Location: 45252-4543 8 bp Feature: gene Location: 45618-47114 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 46026-46482 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 46026-46482 bp Feature: gene Location: 47260-48708 bp Feature: domain Description: COG2865 Location: 47266-48664 bp Feature: domain Description: COG2865 Location: 47266-48664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-AbiP2, COG2865 (Predicted transcriptional regulator, contains HTH domain )