myRT

myRT report for GCA_003937935.1_ASM393793v1

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Seq: RHVA01000117.1 (3419 bp)
Overview 1 RT 1: 61-3320 bp Neighborhood of RT #1 [61, 3352] RVT-AbiP2 HsdM Feature: gene Location: 61-1536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: gene Location: 1874-3352 bp Feature: domain Description: HsdM Location: 1895-3320 bp Feature: domain Description: HsdM Location: 1 895-3320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: RHVA01000123.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RHVA01000005.1 (98380 bp)
Overview 1 RT 1: 31559-37759 bp Neighborhood of RT #1 [31559, 37759] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 31559-32785 bp Feature: domain Description: INT_ICEBs1_C_like Location: 32162-32717 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3 2162-3 2717 bp Feature: gene Location: 33374-34822 bp Feature: domain Description: COG2865 Location: 33380-34778 bp Feature: domain Description: COG2865 Location: 3 3 3 80-3 4778 bp Feature: gene Location: 34968-36464 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35376-35832 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 53 76-3 583 2 bp Feature: gene Location: 36636-36872 bp Feature: domain Description: HTH_XRE Location: 36678-36864 bp Feature: domain Description: HTH_XRE Location: 3 6678-3 6864 bp Feature: gene Location: 36986-37759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)