myRT

myRT report for GCA_003938005.1_ASM393800v1

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Seq: RHVF01000006.1 (99559 bp)
Overview 1 RT 1: 7601-20129 bp Neighborhood of RT #1 [7601, 20218] AAA_10 RVT-GII AAA_10 ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 7601-9784 bp Feature: gene Location: 9787-10704 bp Feature: domain Description: AAA_10 Location: 9793-10672 bp Feature: domain Description: AAA_1 0 Location: 9793-1 0672 bp Feature: gene Location: 10838-12622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11096-11795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 096-1 1 795 bp Feature: gene Location: 13361-14965 bp Feature: domain Description: AAA_10 Location: 14744-14930 bp Feature: domain Description: AAA_1 0 Location: 1 4744-1 4930 bp Feature: gene Location: 15377-15874 bp Feature: domain Description: ArdA Location: 15395-15860 bp Feature: domain Description: ArdA Location: 1 5395-1 5860 bp Feature: gene Location: 15991-16158 bp Feature: gene Location: 16319-18229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16652-17390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6652-1 7390 bp Feature: domain Description: HNHc Note: nucleases Location: 17945-18110 bp Feature: domain Description: HNHc Note: nucleases Location: 1 7945-1 81 1 0 bp Feature: gene Location: 18738-18887 bp Feature: gene Location: 19013-20218 bp Feature: domain Description: HTH_XRE Location: 19058-19202 bp Feature: domain Description: HTH_XRE Location: 1 9058-1 9202 bp Feature: domain Description: Rol_Rep_N Location: 19229-19496 bp Feature: domain Description: Rol_Rep_N Location: 1 9229-1 9496 bp Feature: domain Description: Rep_trans Location: 19520-20129 bp Feature: domain Description: Rep_trans Location: 1 9520-201 29 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, ArdA (pfam07275), HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: RHVF01000094.1 (3552 bp)
Overview 1 RT 1: 41-3520 bp Neighborhood of RT #1 [41, 3549] RVT-AbiP2 HsdM Rve Feature: gene Location: 41-1516 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: gene Location: 1854-3332 bp Feature: domain Description: HsdM Location: 1875-3300 bp Feature: domain Description: HsdM Location: 1875-3300 bp Feature: gene Location: 3355-3549 bp Feature: domain Description: Rve Location: 3358-3520 bp Feature: domain Description: Rve Location: 3358-352 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rve (COG3316)