myRT

myRT report for GCA_003938265.1_ASM393826v1

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Seq: RHVC01000113.1 (3419 bp)
Overview 1 RT 1: 61-3320 bp Neighborhood of RT #1 [61, 3352] RVT-AbiP2 HsdM Feature: gene Location: 61-1536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: gene Location: 1874-3352 bp Feature: domain Description: HsdM Location: 1895-3320 bp Feature: domain Description: HsdM Location: 1 895-3320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: RHVC01000120.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RHVC01000005.1 (99280 bp)
Overview 1 RT 1: 31508-37708 bp Neighborhood of RT #1 [31508, 37708] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 31508-32734 bp Feature: domain Description: INT_ICEBs1_C_like Location: 32111-32666 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3 2111-3 2666 bp Feature: gene Location: 33323-34771 bp Feature: domain Description: COG2865 Location: 33329-34727 bp Feature: domain Description: COG2865 Location: 3 3 3 29-3 4727 bp Feature: gene Location: 34917-36413 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35325-35781 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 53 25-3 5781 bp Feature: gene Location: 36585-36821 bp Feature: domain Description: HTH_XRE Location: 36627-36813 bp Feature: domain Description: HTH_XRE Location: 3 6627-3 6813 bp Feature: gene Location: 36935-37708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)