myRT

myRT report for GCA_003938365.1_ASM393836v1

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Seq: RHVQ01000108.1 (3373 bp)
Overview 1 RT 1: 43-2672 bp Neighborhood of RT #1 [43, 3334] HsdM RVT-AbiP2 Feature: gene Location: 43-1521 bp Feature: domain Description: HsdM Location: 64-1489 bp Feature: domain Description: HsdM Location: 64-1 489 bp Feature: gene Location: 1859-3334 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2207-2672 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2207-2672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: RHVQ01000116.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RHVQ01000005.1 (94661 bp)
Overview 1 RT 1: 27582-33782 bp Neighborhood of RT #1 [27582, 33782] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 27582-28808 bp Feature: domain Description: INT_ICEBs1_C_like Location: 28185-28740 bp Feature: domain Description: INT_ICEBs1_C_like Location: 28185-28740 bp Feature: gene Location: 29397-30845 bp Feature: domain Description: COG2865 Location: 29403-30801 bp Feature: domain Description: COG2865 Location: 29403 -3 0801 bp Feature: gene Location: 30991-32487 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 31399-31855 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 13 99-3 1855 bp Feature: gene Location: 32659-32895 bp Feature: domain Description: HTH_XRE Location: 32701-32887 bp Feature: domain Description: HTH_XRE Location: 3 2701-3 2887 bp Feature: gene Location: 33009-33782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)