myRT

myRT report for GCA_003938375.1_ASM393837v1

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Seq: RHWJ01000120.1 (3717 bp)
Overview 1 RT 1: 41-3685 bp Neighborhood of RT #1 [41, 3714] RVT-AbiP2 HsdM Rve Feature: gene Location: 41-1516 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: gene Location: 1854-3332 bp Feature: domain Description: HsdM Location: 1875-3300 bp Feature: domain Description: HsdM Location: 1 875-3300 bp Feature: gene Location: 3355-3714 bp Feature: domain Description: Rve Location: 3358-3685 bp Feature: domain Description: Rve Location: 3358-3685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: RHWJ01000015.1 (52780 bp)
Overview 1 RT 1: 31676-37876 bp Neighborhood of RT #1 [31676, 37876] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 31676-32902 bp Feature: domain Description: INT_ICEBs1_C_like Location: 32279-32834 bp Feature: domain Description: INT_ICEBs1_C_like Location: 32 2 79-32 834 bp Feature: gene Location: 33491-34939 bp Feature: domain Description: COG2865 Location: 33497-34895 bp Feature: domain Description: COG2 865 Location: 33497-34895 bp Feature: gene Location: 35085-36581 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35493-35949 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35493-35949 bp Feature: gene Location: 36753-36989 bp Feature: domain Description: HTH_XRE Location: 36795-36981 bp Feature: domain Description: HTH_XRE Location: 36795-36981 bp Feature: gene Location: 37103-37876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)

Seq: RHWJ01000133.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 23 47-2512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)