myRT

myRT report for GCA_003938395.1_ASM393839v1

Download annotations/find similar RTs

Seq: RHVX01000113.1 (3572 bp)
Overview 1 RT 1: 61-3540 bp Neighborhood of RT #1 [61, 3569] RVT-AbiP2 HsdM Rve Feature: gene Location: 61-1536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: gene Location: 1874-3352 bp Feature: domain Description: HsdM Location: 1895-3320 bp Feature: domain Description: HsdM Location: 1 895-3320 bp Feature: gene Location: 3375-3569 bp Feature: domain Description: Rve Location: 3378-3540 bp Feature: domain Description: Rve Location: 3378-3540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: RHVX01000125.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RHVX01000005.1 (90955 bp)
Overview 1 RT 1: 31685-37885 bp Neighborhood of RT #1 [31685, 37885] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 31685-32911 bp Feature: domain Description: INT_ICEBs1_C_like Location: 32288-32843 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3 2288-3 2843 bp Feature: gene Location: 33500-34948 bp Feature: domain Description: COG2865 Location: 33506-34904 bp Feature: domain Description: COG2865 Location: 3 3 506-3 4904 bp Feature: gene Location: 35094-36590 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35502-35958 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 5502-3 5958 bp Feature: gene Location: 36762-36998 bp Feature: domain Description: HTH_XRE Location: 36804-36990 bp Feature: domain Description: HTH_XRE Location: 3 6804-3 6990 bp Feature: gene Location: 37112-37885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)