myRT

myRT report for GCA_003938495.1_ASM393849v1

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Seq: RHVI01000004.1 (91249 bp)
Overview 1 RT 1: 53128-59260 bp Neighborhood of RT #1 [53128, 59328] HTH_XRE RVT-AbiP2 COG2865 INT_ICEBs1_C_like Feature: gene Location: 53128-53901 bp Feature: gene Location: 54015-54251 bp Feature: domain Description: HTH_XRE Location: 54057-54243 bp Feature: domain Description: HTH_XRE Location: 54057-54243 bp Feature: gene Location: 54423-55919 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 54831-55287 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 54831 -55287 bp Feature: gene Location: 56065-57513 bp Feature: domain Description: COG2865 Location: 56071-57469 bp Feature: domain Description: COG2865 Location: 56071 -57469 bp Feature: gene Location: 58102-59328 bp Feature: domain Description: INT_ICEBs1_C_like Location: 58705-59260 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 58705-59260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-AbiP2, COG2865 (Predicted transcriptional regulator, contains HTH domain ), INT_ICEBs1_C_like (cd01189)

Seq: RHVI01000113.1 (3572 bp)
Overview 1 RT 1: 61-3540 bp Neighborhood of RT #1 [61, 3569] RVT-AbiP2 HsdM Rve Feature: gene Location: 61-1536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: gene Location: 1874-3352 bp Feature: domain Description: HsdM Location: 1895-3320 bp Feature: domain Description: HsdM Location: 1895-332 0 bp Feature: gene Location: 3375-3569 bp Feature: domain Description: Rve Location: 3378-3540 bp Feature: domain Description: Rve Location: 3378-3540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: RHVI01000124.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 23 47-2512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)