myRT

myRT report for GCA_003938865.1_ASM393886v1

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Seq: RKIX01000003.1 (3511761 bp)
Overview 1 RT 1: 2129689-2138456 bp 2 RT 2: 3089901-3094222 bp Neighborhood of RT #1 [2129689, 2138456] HsdM RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like RVT-UG5 PRK07209 Neighborhood of RT #2 [3089901, 3094242] DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 2129689-2131164 bp Feature: domain Description: HsdM Location: 2129695-2131156 bp Feature: domain Description: HsdM Location: 21 29695-21 31 1 56 bp Feature: gene Location: 2131171-2133522 bp Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 2131480-2131945 bp Feature: domain Description: RMtype1 _S_Sau1 1 32ORF3780P-TRD2-CR2_like Location: 21 31 480-21 31 945 bp Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 2132584-2132806 bp Feature: domain Description: RMtype1 _S_Sau1 1 32ORF3780P-TRD2-CR2_like Location: 21 32584-21 32806 bp Feature: gene Location: 2133538-2136780 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2134060-2134555 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21 34060-21 34555 bp Feature: gene Location: 2136903-2138186 bp Feature: domain Description: PRK07209 Location: 2136915-2138184 bp Feature: domain Description: PRK07209 Location: 21 3691 5-21 381 84 bp Feature: gene Location: 2138328-2138456 bp Feature: gene Location: 3089901-3090188 bp Feature: gene Location: 3090276-3090449 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3090360-3090444 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3090360-3090444 bp Feature: gene Location: 3090563-3092239 bp Feature: domain Description: RVT_N Location: 3090623-3090866 bp Feature: domain Description: RVT_N Location: 3090623-3090866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3090911-3091547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309091 1 -3091 547 bp Feature: domain Description: GIIM Note: maturase Location: 3091601-3091832 bp Feature: domain Description: GIIM Note: maturase Location: 3091 601 -3091 832 bp Feature: gene Location: 3092267-3092446 bp Feature: gene Location: 3092779-3094242 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3093013-3093226 bp Feature: domain Description: LZ_Tnp_IS66 Location: 309301 3-3093226 bp Feature: domain Description: zf-IS66 Location: 3093262-3093388 bp Feature: domain Description: zf-IS66 Location: 3093262-3093388 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3093430-3094222 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3093430-3094222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like (cd17266), RVT-UG5, PRK07209 (ribonucleotide-diphosphate reductase subunit beta; Validated), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)
DDE_Tnp_IS66 (pfam03050)

Seq: RKIX01000002.1 (53783 bp)
Overview 1 RT 1: 49935-53610 bp Neighborhood of RT #1 [49935, 53624] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 49935-50456 bp Feature: gene Location: 50936-51334 bp Feature: domain Description: PHA02517 Location: 50966-51314 bp Feature: domain Description: PHA02 517 Location: 50966-51314 bp Feature: gene Location: 51827-53068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52025-52682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 02 5-52 682 bp Feature: domain Description: GIIM Note: maturase Location: 52760-52991 bp Feature: domain Description: GIIM Note: maturase Location: 52 760-52 991 bp Feature: gene Location: 53121-53624 bp Feature: domain Description: PHA02517 Location: 53148-53610 bp Feature: domain Description: PHA02 517 Location: 53148-53610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)