myRT

myRT report for GCA_003938985.1_ASM393898v1

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Seq: RKIY01000001.1 (362420 bp)
Overview 1 RT 1: 110920-117014 bp 2 RT 2: 139653-149539 bp 3 RT 3: 151882-156691 bp 4 RT 4: 206716-215505 bp 5 RT 5: 221485-225833 bp Neighborhood of RT #1 [110920, 117046] rve Tn7_Tnp_TnsA_C RVT-GII Intron_maturas2 HNHc Tn7_Tnp_TnsA_N TIGR00730 Neighborhood of RT #2 [139653, 149539] PRK06850 HEPN RVT-GII NT_KNTase_like PRTRC_ThiF RVT-GII Intron_maturas2 HNHc E1_enzyme_family Neighborhood of RT #3 [151882, 156696] beta_clamp RVT-GII COG4712 Neighborhood of RT #4 [206716, 215505] TraC-F-type RVT-GII HNHc TraC-F-type Neighborhood of RT #5 [221485, 225833] RVT-GII HNHc Feature: gene Location: 110920-112404 bp Feature: domain Description: rve Location: 111760-112174 bp Feature: domain Description: rve Location: 1 1 1 760-1 1 21 74 bp Feature: gene Location: 112401-112682 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 112425-112602 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 1 1 2425-1 1 2602 bp Feature: gene Location: 113300-115117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113564-114395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3564-1 1 4395 bp Feature: domain Description: Intron_maturas2 Location: 114473-114767 bp Feature: domain Description: Intron_maturas2 Location: 1 1 4473-1 1 4767 bp Feature: domain Description: HNHc Note: nucleases Location: 114914-115091 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 491 4-1 1 5091 bp Feature: gene Location: 115183-115788 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 115402-115681 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 1 1 5402-1 1 5681 bp Feature: gene Location: 116477-117046 bp Feature: domain Description: TIGR00730 Location: 116486-117014 bp Feature: domain Description: TIGR00730 Location: 1 1 6486-1 1 701 4 bp Feature: gene Location: 139653-141425 bp Feature: domain Description: PRK06850 Location: 139668-140898 bp Feature: domain Description: PRK06850 Location: 1 39668-1 40898 bp Feature: gene Location: 141550-141993 bp Feature: domain Description: HEPN Location: 141604-141952 bp Feature: domain Description: HEPN Location: 1 41 604-1 41 952 bp Feature: gene Location: 142139-144070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142460-143195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42460-1 431 95 bp Feature: gene Location: 144829-145227 bp Feature: domain Description: NT_KNTase_like Location: 144910-145204 bp Feature: domain Description: NT_KNTase_like Location: 1 4491 0-1 45204 bp Feature: gene Location: 145249-145620 bp Feature: gene Location: 145640-146182 bp Feature: domain Description: PRTRC_ThiF Location: 145703-146162 bp Feature: domain Description: PRTRC_ThiF Location: 1 45703-1 461 62 bp Feature: gene Location: 146434-148374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146764-147601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 46764-1 47601 bp Feature: domain Description: Intron_maturas2 Location: 147739-148030 bp Feature: domain Description: Intron_maturas2 Location: 1 47739-1 48030 bp Feature: domain Description: HNHc Note: nucleases Location: 148162-148321 bp Feature: domain Description: HNHc Note: nucleases Location: 1 481 62-1 48321 bp Feature: gene Location: 148943-149125 bp Feature: domain Description: E1_enzyme_family Location: 148991-149111 bp Feature: domain Description: E1 _enzyme_family Location: 1 48991 -1 491 1 1 bp Feature: gene Location: 149138-149539 bp Feature: gene Location: 151882-152994 bp Feature: domain Description: beta_clamp Location: 151885-152989 bp Feature: domain Description: beta_clamp Location: 1 51 885-1 52989 bp Feature: gene Location: 153075-153602 bp Feature: gene Location: 153680-155581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153998-154700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 53998-1 54700 bp Feature: gene Location: 155776-155916 bp Feature: gene Location: 156340-156696 bp Feature: domain Description: COG4712 Location: 156349-156691 bp Feature: domain Description: COG471 2 Location: 1 56349-1 56691 bp Feature: gene Location: 206716-207687 bp Feature: domain Description: TraC-F-type Location: 207136-207610 bp Feature: domain Description: TraC-F-type Location: 2071 36-20761 0 bp Feature: gene Location: 207834-208010 bp Feature: gene Location: 208403-210235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208703-209408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208703-209408 bp Feature: domain Description: HNHc Note: nucleases Location: 209987-210119 bp Feature: domain Description: HNHc Note: nucleases Location: 209987-21 01 1 9 bp Feature: gene Location: 210646-211494 bp Feature: domain Description: TraC-F-type Location: 210787-211333 bp Feature: domain Description: TraC-F-type Location: 21 0787-21 1 333 bp Feature: gene Location: 211525-215505 bp Feature: gene Location: 221485-221694 bp Feature: gene Location: 221761-222162 bp Feature: gene Location: 222873-224672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223170-223863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2231 70-223863 bp Feature: domain Description: HNHc Note: nucleases Location: 224421-224559 bp Feature: domain Description: HNHc Note: nucleases Location: 224421 -224559 bp Feature: gene Location: 224839-225204 bp Feature: gene Location: 225423-225833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RKIY01000003.1 (5302858 bp)
Overview 1 RT 1: 120855-125005 bp 2 RT 2: 488497-494292 bp 3 RT 3: 550113-555676 bp 4 RT 4: 2927586-2931587 bp 5 RT 5: 4164796-4168787 bp 6 RT 6: 4454992-4467353 bp Neighborhood of RT #1 [120855, 125005] InsE RVT-GII HNHc Neighborhood of RT #2 [488497, 494294] PRK12451 RVT-GII Intron_maturas2 HNHc SAM_MT YphP_YqiW Neighborhood of RT #3 [550113, 555699] spore_ytfJ RVT_N RVT-GII GIIM APH_ChoK_like_1 Acetyltransf_10 Neighborhood of RT #4 [2927586, 2931589] DUF4870 PRK10420 RVT-GII DDE_Tnp_ISL3 PRK10420 Neighborhood of RT #5 [4164796, 4168885] amiF RVT-GII HNHc amiF YugN Neighborhood of RT #6 [4454992, 4467353] CcdC B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Feature: gene Location: 120855-120989 bp Feature: domain Description: InsE Location: 120861-120975 bp Feature: domain Description: InsE Location: 12 0861-12 0975 bp Feature: gene Location: 121098-121562 bp Feature: gene Location: 122180-123979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122477-123170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 477-12 3170 bp Feature: domain Description: HNHc Note: nucleases Location: 123728-123866 bp Feature: domain Description: HNHc Note: nucleases Location: 12 372 8-12 3866 bp Feature: gene Location: 124576-124758 bp Feature: gene Location: 124763-125005 bp Feature: gene Location: 488497-490185 bp Feature: domain Description: PRK12451 Location: 488500-490183 bp Feature: domain Description: PRK12 451 Location: 488500-490183 bp Feature: gene Location: 490486-490653 bp Feature: gene Location: 490811-492628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491075-491906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491075-491906 bp Feature: domain Description: Intron_maturas2 Location: 491984-492278 bp Feature: domain Description: Intron_maturas2 Location: 491984-492 2 78 bp Feature: domain Description: HNHc Note: nucleases Location: 492425-492602 bp Feature: domain Description: HNHc Note: nucleases Location: 492 42 5-492 602 bp Feature: gene Location: 493244-493810 bp Feature: domain Description: SAM_MT Location: 493367-493799 bp Feature: domain Description: SAM_MT Location: 493367-493799 bp Feature: gene Location: 493860-494294 bp Feature: domain Description: YphP_YqiW Location: 493884-494292 bp Feature: domain Description: YphP_YqiW Location: 493884-4942 92 bp Feature: gene Location: 550113-550538 bp Feature: domain Description: spore_ytfJ Location: 550119-550488 bp Feature: domain Description: spore_ytfJ Location: 550119-550488 bp Feature: gene Location: 551515-551838 bp Feature: gene Location: 552472-554118 bp Feature: domain Description: RVT_N Location: 552514-552751 bp Feature: domain Description: RVT_N Location: 552 514-552 751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552805-553465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552 805-553465 bp Feature: domain Description: GIIM Note: maturase Location: 553534-553765 bp Feature: domain Description: GIIM Note: maturase Location: 553534-553765 bp Feature: gene Location: 554358-555239 bp Feature: domain Description: APH_ChoK_like_1 Location: 554439-555075 bp Feature: domain Description: APH_ChoK_like_1 Location: 554439-555075 bp Feature: gene Location: 555271-555699 bp Feature: domain Description: Acetyltransf_10 Location: 555388-555676 bp Feature: domain Description: Acetyltransf_10 Location: 555388-555676 bp Feature: gene Location: 2927586-2927903 bp Feature: domain Description: DUF4870 Location: 2927604-2927880 bp Feature: domain Description: DUF4870 Location: 2 92 7604-2 92 7880 bp Feature: gene Location: 2928200-2929858 bp Feature: domain Description: PRK10420 Location: 2928203-2929856 bp Feature: domain Description: PRK1042 0 Location: 2 92 82 03-2 92 9856 bp Feature: gene Location: 2930050-2930289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2930107-2930227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 930107-2 9302 2 7 bp Feature: gene Location: 2930781-2931338 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2930832-2931009 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2 930832 -2 931009 bp Feature: gene Location: 2931425-2931589 bp Feature: domain Description: PRK10420 Location: 2931428-2931587 bp Feature: domain Description: PRK1042 0 Location: 2 93142 8-2 931587 bp Feature: gene Location: 4164796-4165185 bp Feature: domain Description: amiF Location: 4164799-4165171 bp Feature: domain Description: amiF Location: 4164799-4165171 bp Feature: gene Location: 4165332-4165508 bp Feature: gene Location: 4165901-4167733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4166201-4166906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41662 01-4166906 bp Feature: domain Description: HNHc Note: nucleases Location: 4167485-4167617 bp Feature: domain Description: HNHc Note: nucleases Location: 4167485-4167617 bp Feature: gene Location: 4167850-4168473 bp Feature: domain Description: amiF Location: 4167853-4168468 bp Feature: domain Description: amiF Location: 4167853-4168468 bp Feature: gene Location: 4168520-4168885 bp Feature: domain Description: YugN Location: 4168541-4168787 bp Feature: domain Description: YugN Location: 4168541-4168787 bp Feature: gene Location: 4454992-4455498 bp Feature: domain Description: CcdC Location: 4455001-4455463 bp Feature: domain Description: CcdC Location: 4455001-4455463 bp Feature: gene Location: 4455561-4456841 bp Feature: domain Description: B_ant_repeat Location: 4455639-4455750 bp Feature: domain Description: B_ant_repeat Location: 4455639-4455750 bp Feature: domain Description: B_ant_repeat Location: 4455990-4456146 bp Feature: domain Description: B_ant_repeat Location: 4455990-4456146 bp Feature: domain Description: B_ant_repeat Location: 4456389-4456545 bp Feature: domain Description: B_ant_repeat Location: 4456389-4456545 bp Feature: gene Location: 4457543-4459471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4457864-4458599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4457864-4458599 bp Feature: domain Description: HNHc Note: nucleases Location: 4459190-4459355 bp Feature: domain Description: HNHc Note: nucleases Location: 4459190-4459355 bp Feature: gene Location: 4459640-4466005 bp Feature: domain Description: B_ant_repeat Location: 4459649-4459787 bp Feature: domain Description: B_ant_repeat Location: 4459649-4459787 bp Feature: domain Description: B_ant_repeat Location: 4460024-4460177 bp Feature: domain Description: B_ant_repeat Location: 446002 4-4460177 bp Feature: domain Description: B_ant_repeat Location: 4460414-4460567 bp Feature: domain Description: B_ant_repeat Location: 4460414-4460567 bp Feature: domain Description: B_ant_repeat Location: 4460807-4460963 bp Feature: domain Description: B_ant_repeat Location: 4460807-4460963 bp Feature: domain Description: B_ant_repeat Location: 4461203-4461356 bp Feature: domain Description: B_ant_repeat Location: 44612 03-4461356 bp Feature: domain Description: B_ant_repeat Location: 4461599-4461755 bp Feature: domain Description: B_ant_repeat Location: 4461599-4461755 bp Feature: domain Description: B_ant_repeat Location: 4461995-4462151 bp Feature: domain Description: B_ant_repeat Location: 4461995-4462 151 bp Feature: domain Description: B_ant_repeat Location: 4462391-4462547 bp Feature: domain Description: B_ant_repeat Location: 4462 391-4462 547 bp Feature: domain Description: B_ant_repeat Location: 4462787-4462943 bp Feature: domain Description: B_ant_repeat Location: 4462 787-4462 943 bp Feature: domain Description: B_ant_repeat Location: 4463183-4463339 bp Feature: domain Description: B_ant_repeat Location: 4463183-4463339 bp Feature: domain Description: B_ant_repeat Location: 4463579-4463735 bp Feature: domain Description: B_ant_repeat Location: 4463579-4463735 bp Feature: domain Description: B_ant_repeat Location: 4463975-4464131 bp Feature: domain Description: B_ant_repeat Location: 4463975-4464131 bp Feature: domain Description: B_ant_repeat Location: 4464371-4464527 bp Feature: domain Description: B_ant_repeat Location: 4464371-446452 7 bp Feature: domain Description: B_ant_repeat Location: 4464767-4464920 bp Feature: domain Description: B_ant_repeat Location: 4464767-446492 0 bp Feature: domain Description: B_ant_repeat Location: 4465163-4465319 bp Feature: domain Description: B_ant_repeat Location: 4465163-4465319 bp Feature: domain Description: B_ant_repeat Location: 4465559-4465715 bp Feature: domain Description: B_ant_repeat Location: 4465559-4465715 bp Feature: gene Location: 4466274-4467353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT