myRT

myRT report for GCA_003939145.1_ASM393914v1

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Seq: RHUT01000116.1 (3257 bp)
Overview 1 RT 1: 583-2742 bp Neighborhood of RT #1 [583, 2742] RVT-GII GIIM Feature: gene Location: 583-1971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904-1519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904-1 51 9 bp Feature: domain Description: GIIM Note: maturase Location: 1576-1792 bp Feature: domain Description: GIIM Note: maturase Location: 1 576-1 792 bp Feature: gene Location: 2021-2455 bp Feature: gene Location: 2458-2742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RHUT01000124.1 (2761 bp)
Overview 1 RT 1: 131-1922 bp Neighborhood of RT #1 [131, 2041] RVT-GII HNHc Feature: gene Location: 131-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-12 02 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-192 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RHUT01000005.1 (94661 bp)
Overview 1 RT 1: 60880-67012 bp Neighborhood of RT #1 [60880, 67080] HTH_XRE RVT-AbiP2 COG2865 INT_ICEBs1_C_like Feature: gene Location: 60880-61653 bp Feature: gene Location: 61767-62003 bp Feature: domain Description: HTH_XRE Location: 61809-61995 bp Feature: domain Description: HTH_XRE Location: 61809-61995 bp Feature: gene Location: 62175-63671 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 62583-63039 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 62583 -63 03 9 bp Feature: gene Location: 63817-65265 bp Feature: domain Description: COG2865 Location: 63823-65221 bp Feature: domain Description: COG2865 Location: 63 823 -65221 bp Feature: gene Location: 65854-67080 bp Feature: domain Description: INT_ICEBs1_C_like Location: 66457-67012 bp Feature: domain Description: INT_ICEBs1_C_like Location: 66457-67012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-AbiP2, COG2865 (Predicted transcriptional regulator, contains HTH domain ), INT_ICEBs1_C_like (cd01189)