myRT

myRT report for GCA_003939175.1_ASM393917v1

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Seq: RHVD01000119.1 (3459 bp)
Overview 1 RT 1: 61-3320 bp Neighborhood of RT #1 [61, 3352] RVT-AbiP2 HsdM Feature: gene Location: 61-1536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: gene Location: 1874-3352 bp Feature: domain Description: HsdM Location: 1895-3320 bp Feature: domain Description: HsdM Location: 1 895-3320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: RHVD01000005.1 (98498 bp)
Overview 1 RT 1: 60860-66992 bp Neighborhood of RT #1 [60860, 67060] HTH_XRE RVT-AbiP2 COG2865 INT_ICEBs1_C_like Feature: gene Location: 60860-61633 bp Feature: gene Location: 61747-61983 bp Feature: domain Description: HTH_XRE Location: 61789-61975 bp Feature: domain Description: HTH_XRE Location: 61789-61975 bp Feature: gene Location: 62155-63651 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 62563-63019 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 62 563-63019 bp Feature: gene Location: 63797-65245 bp Feature: domain Description: COG2865 Location: 63803-65201 bp Feature: domain Description: COG2 865 Location: 63803-652 01 bp Feature: gene Location: 65834-67060 bp Feature: domain Description: INT_ICEBs1_C_like Location: 66437-66992 bp Feature: domain Description: INT_ICEBs1_C_like Location: 66437-66992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-AbiP2, COG2865 (Predicted transcriptional regulator, contains HTH domain ), INT_ICEBs1_C_like (cd01189)

Seq: RHVD01000127.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 23 47-2512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)