myRT

myRT report for GCA_003939215.1_ASM393921v1

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Seq: RHWF01000005.1 (91426 bp)
Overview 1 RT 1: 32099-38299 bp Neighborhood of RT #1 [32099, 38299] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 32099-33325 bp Feature: domain Description: INT_ICEBs1_C_like Location: 32702-33257 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 32702-33257 bp Feature: gene Location: 33914-35362 bp Feature: domain Description: COG2865 Location: 33920-35318 bp Feature: domain Description: COG2865 Location: 33920-3531 8 bp Feature: gene Location: 35508-37004 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35916-36372 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3591 6-36372 bp Feature: gene Location: 37176-37412 bp Feature: domain Description: HTH_XRE Location: 37218-37404 bp Feature: domain Description: HTH_XRE Location: 3721 8-37404 bp Feature: gene Location: 37526-38299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)

Seq: RHWF01000109.1 (3572 bp)
Overview 1 RT 1: 61-3540 bp Neighborhood of RT #1 [61, 3569] RVT-AbiP2 HsdM Rve Feature: gene Location: 61-1536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: gene Location: 1874-3352 bp Feature: domain Description: HsdM Location: 1895-3320 bp Feature: domain Description: HsdM Location: 1895-332 0 bp Feature: gene Location: 3375-3569 bp Feature: domain Description: Rve Location: 3378-3540 bp Feature: domain Description: Rve Location: 3378-3540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: RHWF01000119.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 23 47-2512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)