myRT

myRT report for GCA_003939705.1_ASM393970v1

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Seq: RHUS01000005.1 (95570 bp)
Overview 1 RT 1: 28491-34691 bp Neighborhood of RT #1 [28491, 34691] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 28491-29717 bp Feature: domain Description: INT_ICEBs1_C_like Location: 29094-29649 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 29094-29649 bp Feature: gene Location: 30306-31754 bp Feature: domain Description: COG2865 Location: 30312-31710 bp Feature: domain Description: COG2865 Location: 3031 2-31 71 0 bp Feature: gene Location: 31900-33396 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 32308-32764 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 32308-32764 bp Feature: gene Location: 33568-33804 bp Feature: domain Description: HTH_XRE Location: 33610-33796 bp Feature: domain Description: HTH_XRE Location: 3361 0-33796 bp Feature: gene Location: 33918-34691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)

Seq: RHUS01000122.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RHUS01000115.1 (3257 bp)
Overview 1 RT 1: 583-2742 bp Neighborhood of RT #1 [583, 2742] RVT-GII GIIM Feature: gene Location: 583-1971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904-1519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904-1519 bp Feature: domain Description: GIIM Note: maturase Location: 1576-1792 bp Feature: domain Description: GIIM Note: maturase Location: 1576-1792 bp Feature: gene Location: 2021-2455 bp Feature: gene Location: 2458-2742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)