myRT

myRT report for GCA_003939765.1_ASM393976v1

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Seq: RHVM01000023.1 (34154 bp)
Overview 1 RT 1: 8987-23027 bp Neighborhood of RT #1 [8987, 23170] AAA_10 RVT-GII AAA_10 TcpE ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans FtsK Feature: gene Location: 8987-11170 bp Feature: gene Location: 11173-12090 bp Feature: domain Description: AAA_10 Location: 11179-12058 bp Feature: domain Description: AAA_1 0 Location: 1 1 1 79-1 2058 bp Feature: gene Location: 12224-14008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12482-13181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2482-1 31 81 bp Feature: gene Location: 14747-16300 bp Feature: domain Description: AAA_10 Location: 16079-16265 bp Feature: domain Description: AAA_1 0 Location: 1 6079-1 6265 bp Feature: gene Location: 16284-16781 bp Feature: domain Description: TcpE Location: 16407-16707 bp Feature: domain Description: TcpE Location: 1 6407-1 6707 bp Feature: gene Location: 16765-17262 bp Feature: domain Description: ArdA Location: 16783-17248 bp Feature: domain Description: ArdA Location: 1 6783-1 7248 bp Feature: gene Location: 17379-17546 bp Feature: gene Location: 17707-19617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18040-18778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8040-1 8778 bp Feature: domain Description: HNHc Note: nucleases Location: 19333-19498 bp Feature: domain Description: HNHc Note: nucleases Location: 1 9333-1 9498 bp Feature: gene Location: 20401-21606 bp Feature: domain Description: HTH_XRE Location: 20446-20590 bp Feature: domain Description: HTH_XRE Location: 20446-20590 bp Feature: domain Description: Rol_Rep_N Location: 20617-20884 bp Feature: domain Description: Rol_Rep_N Location: 2061 7-20884 bp Feature: domain Description: Rep_trans Location: 20908-21517 bp Feature: domain Description: Rep_trans Location: 20908-21 51 7 bp Feature: gene Location: 21785-23170 bp Feature: domain Description: FtsK Location: 22394-23027 bp Feature: domain Description: FtsK Location: 22394-23027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648), ArdA (pfam07275), HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), FtsK (COG1674)

Seq: RHVM01000103.1 (3686 bp)
Overview 1 RT 1: 1-2964 bp Neighborhood of RT #1 [1, 3626] Rve HsdM RVT-AbiP2 Feature: gene Location: 1-312 bp Feature: domain Description: Rve Location: 7-283 bp Feature: domain Description: Rve Location: 7-2 83 bp Feature: gene Location: 335-1813 bp Feature: domain Description: HsdM Location: 356-1781 bp Feature: domain Description: HsdM Location: 356-1781 bp Feature: gene Location: 2151-3626 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2499-2964 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 499-2 964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HsdM (COG0286), RVT-AbiP2