myRT

myRT report for GCA_003940215.1_ASM394021v1

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Seq: RHWB01000121.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 054-1 792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-251 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RHWB01000111.1 (3419 bp)
Overview 1 RT 1: 61-3320 bp Neighborhood of RT #1 [61, 3352] RVT-AbiP2 HsdM Feature: gene Location: 61-1536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: gene Location: 1874-3352 bp Feature: domain Description: HsdM Location: 1895-3320 bp Feature: domain Description: HsdM Location: 1895-332 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: RHWB01000005.1 (98005 bp)
Overview 1 RT 1: 31010-37210 bp Neighborhood of RT #1 [31010, 37210] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 31010-32236 bp Feature: domain Description: INT_ICEBs1_C_like Location: 31613-32168 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3 1613 -3 2168 bp Feature: gene Location: 32825-34273 bp Feature: domain Description: COG2865 Location: 32831-34229 bp Feature: domain Description: COG2865 Location: 3 283 1-3 4229 bp Feature: gene Location: 34419-35915 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 34827-35283 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 4827-3 5283 bp Feature: gene Location: 36087-36323 bp Feature: domain Description: HTH_XRE Location: 36129-36315 bp Feature: domain Description: HTH_XRE Location: 3 6129-3 63 15 bp Feature: gene Location: 36437-37210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)