myRT

myRT report for GCA_003940245.1_ASM394024v1

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Seq: RHWL01000004.1 (90766 bp)
Overview 1 RT 1: 31439-37639 bp Neighborhood of RT #1 [31439, 37639] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 31439-32665 bp Feature: domain Description: INT_ICEBs1_C_like Location: 32042-32597 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 32042-32597 bp Feature: gene Location: 33254-34702 bp Feature: domain Description: COG2865 Location: 33260-34658 bp Feature: domain Description: COG2865 Location: 33260-34658 bp Feature: gene Location: 34848-36344 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35256-35712 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35256-3571 2 bp Feature: gene Location: 36516-36752 bp Feature: domain Description: HTH_XRE Location: 36558-36744 bp Feature: domain Description: HTH_XRE Location: 36558-36744 bp Feature: gene Location: 36866-37639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)

Seq: RHWL01000130.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RHWL01000121.1 (3419 bp)
Overview 1 RT 1: 61-3320 bp Neighborhood of RT #1 [61, 3352] RVT-AbiP2 HsdM Feature: gene Location: 61-1536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: gene Location: 1874-3352 bp Feature: domain Description: HsdM Location: 1895-3320 bp Feature: domain Description: HsdM Location: 1895-3 3 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)