myRT

myRT report for GCA_003946825.1_ASM394682v1

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Seq: RPSK01000179.1 (333245 bp)
Overview 1 RT 1: 283318-292310 bp Neighborhood of RT #1 [283318, 292330] INT_ICEBs1_C_like AE_Prim_S_like RVT-UG10 InsE PHA02517 Feature: gene Location: 283318-283575 bp Feature: domain Description: INT_ICEBs1_C_like Location: 283390-283561 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 283390-283561 bp Feature: gene Location: 284047-284238 bp Feature: gene Location: 284875-290514 bp Feature: domain Description: AE_Prim_S_like Location: 285022-285304 bp Feature: domain Description: AE_Prim_S_like Location: 285022-285304 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 286291-286945 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 286291 -286945 bp Feature: gene Location: 291135-291455 bp Feature: domain Description: InsE Location: 291159-291312 bp Feature: domain Description: InsE Location: 291 1 59-291 31 2 bp Feature: gene Location: 291590-292330 bp Feature: domain Description: PHA02517 Location: 291605-292310 bp Feature: domain Description: PHA0251 7 Location: 291 605-29231 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), AE_Prim_S_like (cl01287), RVT-UG10, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: RPSK01000071.1 (150689 bp)
Overview 1 RT 1: 87108-94558 bp Neighborhood of RT #1 [87108, 94737] RVT-GII Intron_maturas2 HNHc TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 87108-87581 bp Feature: gene Location: 87599-88744 bp Feature: gene Location: 89344-91167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89620-90442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8962 0-90442 bp Feature: domain Description: Intron_maturas2 Location: 90514-90832 bp Feature: domain Description: Intron_maturas2 Location: 90514-90832 bp Feature: domain Description: HNHc Note: nucleases Location: 90973-91138 bp Feature: domain Description: HNHc Note: nucleases Location: 90973-91138 bp Feature: gene Location: 91306-93495 bp Feature: domain Description: TraG-D_C Location: 91765-92125 bp Feature: domain Description: TraG-D_C Location: 91765-92 12 5 bp Feature: domain Description: Ftsk_gamma Location: 92485-92665 bp Feature: domain Description: Ftsk_gamma Location: 92 485-92 665 bp Feature: domain Description: Ftsk_gamma Location: 92818-92992 bp Feature: domain Description: Ftsk_gamma Location: 92 818-92 992 bp Feature: gene Location: 93754-94737 bp Feature: domain Description: rpsA Location: 94021-94558 bp Feature: domain Description: rpsA Location: 9402 1-94558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)