myRT

myRT report for GCA_003955085.1_ASM395508v1

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Seq: RWWT01000060.1 (14685 bp)
Overview 1 RT 1: 150-4721 bp Neighborhood of RT #1 [150, 4933] RVT-UG5 nitrilase COG4127 TIGR02646 Feature: gene Location: 150-2630 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 153-582 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 53-582 bp Feature: domain Description: nitrilase Location: 1944-2526 bp Feature: domain Description: nitrilase Location: 1 944-2526 bp Feature: gene Location: 3000-3992 bp Feature: domain Description: COG4127 Location: 3006-3981 bp Feature: domain Description: COG41 27 Location: 3006-3981 bp Feature: gene Location: 4055-4933 bp Feature: domain Description: TIGR02646 Location: 4268-4721 bp Feature: domain Description: TIGR02646 Location: 4268-4721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), TIGR02646 (TIGR02646 family protein)

Seq: RWWT01000106.1 (2421 bp)
Overview 1 RT 1: 1-2289 bp Neighborhood of RT #1 [1, 2336] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-189 bp Feature: gene Location: 220-348 bp Feature: gene Location: 618-2336 bp Feature: domain Description: RVT_N Location: 675-912 bp Feature: domain Description: RVT_N Location: 675-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1614 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: HNHc Note: nucleases Location: 2133-2289 bp Feature: domain Description: HNHc Note: nucleases Location: 2 133-2 2 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)