myRT

myRT report for GCA_003955325.1_ASM395532v1

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Seq: RWXA01000115.1 (218291 bp)
Overview 1 RT 1: 49486-58344 bp 2 RT 2: 74613-84910 bp Neighborhood of RT #1 [49486, 58352] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74613, 84921] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49486-50160 bp Feature: domain Description: NTP_transferase_like_1 Location: 49492-50131 bp Feature: domain Description: NTP_transferase_like_1 Location: 49492-501 31 bp Feature: gene Location: 50157-51173 bp Feature: domain Description: COG3178 Location: 50160-51159 bp Feature: domain Description: COG31 78 Location: 501 60-51 1 59 bp Feature: gene Location: 52445-54157 bp Feature: domain Description: RVT_N Location: 52502-52745 bp Feature: domain Description: RVT_N Location: 52502-52745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52790-53426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52790-53426 bp Feature: domain Description: YkfC Location: 53636-53786 bp Feature: domain Description: YkfC Location: 53636-53786 bp Feature: domain Description: HNH Note: nucleases Location: 53963-54101 bp Feature: domain Description: HNH Note: nucleases Location: 53963-541 01 bp Feature: gene Location: 54290-57079 bp Feature: domain Description: LptD Location: 54485-57065 bp Feature: domain Description: LptD Location: 54485-57065 bp Feature: gene Location: 57138-58352 bp Feature: domain Description: PRK10770 Location: 57150-58344 bp Feature: domain Description: PRK1 0770 Location: 571 50-58344 bp Feature: gene Location: 74613-76466 bp Feature: domain Description: PRK05658 Location: 74625-76464 bp Feature: domain Description: PRK05658 Location: 74625-76464 bp Feature: gene Location: 76573-80310 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76681-77338 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76681 -77338 bp Feature: domain Description: PRK09776 Location: 77551-78022 bp Feature: domain Description: PRK09776 Location: 77551 -78022 bp Feature: domain Description: PAS Location: 78112-78604 bp Feature: domain Description: PAS Location: 781 1 2-78604 bp Feature: domain Description: PRK10060 Location: 78613-80260 bp Feature: domain Description: PRK1 0060 Location: 7861 3-80260 bp Feature: gene Location: 81391-83076 bp Feature: domain Description: RVT_N Location: 81448-81688 bp Feature: domain Description: RVT_N Location: 81 448-81 688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81736-82372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 736-82372 bp Feature: domain Description: GIIM Note: maturase Location: 82426-82657 bp Feature: domain Description: GIIM Note: maturase Location: 82426-82657 bp Feature: domain Description: HNH Note: nucleases Location: 82909-83047 bp Feature: domain Description: HNH Note: nucleases Location: 82909-83047 bp Feature: gene Location: 83404-83541 bp Feature: gene Location: 83800-84921 bp Feature: domain Description: COG3177 Location: 83818-84910 bp Feature: domain Description: COG31 77 Location: 8381 8-8491 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )

Seq: RWXA01000124.1 (75431 bp)
Overview 1 RT 1: 23824-27553 bp Neighborhood of RT #1 [23824, 27553] SLATT_5 RVT-UG17 Feature: gene Location: 23824-23958 bp Feature: gene Location: 24942-25238 bp Feature: domain Description: SLATT_5 Location: 24951-25212 bp Feature: domain Description: SLATT_5 Location: 2 4951-2 52 12 bp Feature: gene Location: 25235-26599 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 25463-26066 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 5463-2 6066 bp Feature: gene Location: 26641-27111 bp Feature: gene Location: 27128-27553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: RWXA01000068.1 (139024 bp)
Overview 1 RT 1: 129225-133604 bp Neighborhood of RT #1 [129225, 133604] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 129225-130052 bp Feature: domain Description: ABC_phnC Location: 129255-129969 bp Feature: domain Description: ABC_phnC Location: 129255-129969 bp Feature: gene Location: 130395-131036 bp Feature: domain Description: DUF772 Location: 130545-130740 bp Feature: domain Description: DUF772 Location: 13 0545-13 0740 bp Feature: gene Location: 131425-132693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131638-132295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 163 8-13 2295 bp Feature: domain Description: GIIM Note: maturase Location: 132373-132595 bp Feature: domain Description: GIIM Note: maturase Location: 13 23 73 -13 2595 bp Feature: gene Location: 132843-133241 bp Feature: gene Location: 133425-133604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)