myRT

myRT report for GCA_003965125.1_ASM396512v1

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Seq: RXOX01000006.1 (86936 bp)
Overview 1 RT 1: 27522-33722 bp Neighborhood of RT #1 [27522, 33722] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 27522-28748 bp Feature: domain Description: INT_ICEBs1_C_like Location: 28125-28680 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 281 25-28680 bp Feature: gene Location: 29337-30785 bp Feature: domain Description: COG2865 Location: 29343-30741 bp Feature: domain Description: COG2865 Location: 29343-30741 bp Feature: gene Location: 30931-32427 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 31339-31795 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 31 339-31 795 bp Feature: gene Location: 32599-32835 bp Feature: domain Description: HTH_XRE Location: 32641-32827 bp Feature: domain Description: HTH_XRE Location: 32641 -32827 bp Feature: gene Location: 32949-33722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)

Seq: RXOX01000122.1 (2761 bp)
Overview 1 RT 1: 131-1922 bp Neighborhood of RT #1 [131, 2041] RVT-GII HNHc Feature: gene Location: 131-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-12 02 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-192 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: RXOX01000113.1 (3373 bp)
Overview 1 RT 1: 43-2672 bp Neighborhood of RT #1 [43, 3334] HsdM RVT-AbiP2 Feature: gene Location: 43-1521 bp Feature: domain Description: HsdM Location: 64-1489 bp Feature: domain Description: HsdM Location: 64-1489 bp Feature: gene Location: 1859-3334 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2207-2672 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2207-2672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2