myRT

myRT report for GCA_003965415.1_ASM396541v1

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Seq: RXQP01000041.1 (27051 bp)
Overview 1 RT 1: 13201-18459 bp Neighborhood of RT #1 [13201, 18464] HTH_38 Tra8 PHA02517 RVT-GII GIIM PHA02517 fruct_sucro_rep Feature: gene Location: 13201-14352 bp Feature: domain Description: HTH_38 Location: 13216-13324 bp Feature: domain Description: HTH_38 Location: 1 321 6-1 3324 bp Feature: domain Description: Tra8 Location: 13360-14341 bp Feature: domain Description: Tra8 Location: 1 3360-1 4341 bp Feature: gene Location: 14501-14911 bp Feature: domain Description: PHA02517 Location: 14507-14846 bp Feature: domain Description: PHA0251 7 Location: 1 4507-1 4846 bp Feature: gene Location: 15503-17026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15776-16508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5776-1 6508 bp Feature: domain Description: GIIM Note: maturase Location: 16583-16781 bp Feature: domain Description: GIIM Note: maturase Location: 1 6583-1 6781 bp Feature: gene Location: 17184-17348 bp Feature: domain Description: PHA02517 Location: 17223-17316 bp Feature: domain Description: PHA0251 7 Location: 1 7223-1 731 6 bp Feature: gene Location: 17460-18464 bp Feature: domain Description: fruct_sucro_rep Location: 17481-18459 bp Feature: domain Description: fruct_sucro_rep Location: 1 7481 -1 8459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fruct_sucro_rep (TIGR02417)

Seq: RXQP01000008.1 (209287 bp)
Overview 1 RT 1: 98685-102158 bp Neighborhood of RT #1 [98685, 102160] PRK09678 RVT-UG2 PRK11370 PRK10819 Feature: gene Location: 98685-98906 bp Feature: domain Description: PRK09678 Location: 98688-98895 bp Feature: domain Description: PRK09678 Location: 98688-98895 bp Feature: gene Location: 99098-99244 bp Feature: gene Location: 99390-100679 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 99591-100383 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 99591-100383 bp Feature: gene Location: 100918-101214 bp Feature: domain Description: PRK11370 Location: 100921-101212 bp Feature: domain Description: PRK11370 Location: 10092 1-1012 12 bp Feature: gene Location: 101417-102160 bp Feature: domain Description: PRK10819 Location: 101429-102158 bp Feature: domain Description: PRK10819 Location: 10142 9-102 158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG2, PRK11370 (YciI family protein), PRK10819 (transport protein TonB; Provisional)

Seq: RXQP01000044.1 (18741 bp)
Overview 1 RT 1: 403-3559 bp Neighborhood of RT #1 [403, 3576] DDE_Tnp_IS1 InsA RVT-GII PRK10276 Feature: gene Location: 403-780 bp Feature: domain Description: DDE_Tnp_IS1 Location: 406-778 bp Feature: domain Description: DDE_Tnp_IS1 Location: 406-778 bp Feature: gene Location: 825-1100 bp Feature: domain Description: InsA Location: 828-1092 bp Feature: domain Description: InsA Location: 828-1092 bp Feature: gene Location: 1252-2262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1258-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1258-1870 bp Feature: gene Location: 2374-2739 bp Feature: gene Location: 2764-3576 bp Feature: domain Description: PRK10276 Location: 3196-3559 bp Feature: domain Description: PRK10276 Location: 3 196-3 559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: RXQP01000011.1 (189080 bp)
Overview 1 RT 1: 139711-143237 bp Neighborhood of RT #1 [139711, 143239] RVT-Retrons DinI Feature: gene Location: 139711-139923 bp Feature: gene Location: 140402-140833 bp Feature: gene Location: 140972-141922 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 141152-141695 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14 1152-14 1695 bp Feature: gene Location: 142245-142643 bp Feature: gene Location: 142826-143239 bp Feature: domain Description: DinI Location: 143054-143237 bp Feature: domain Description: DinI Location: 14 3054 -14 3237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DinI (pfam06183)