myRT

myRT report for GCA_003966265.1_ASM396626v1

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Seq: RXNV01000028.1 (13213 bp)
Overview 1 RT 1: 2-3603 bp 2 RT 2: 8658-12735 bp Neighborhood of RT #1 [2, 3603] BID_1 BID_1 RVT-UG4 Neighborhood of RT #2 [8658, 12735] InsE OmpA RVT-UG4 Feature: gene Location: 2-619 bp Feature: domain Description: BID_1 Location: 38-242 bp Feature: domain Description: BID_1 Location: 38-242 bp Feature: domain Description: BID_1 Location: 353-533 bp Feature: domain Description: BID_1 Location: 353-533 bp Feature: gene Location: 676-813 bp Feature: gene Location: 1251-2315 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1629-2067 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 629-2067 bp Feature: gene Location: 3001-3237 bp Feature: gene Location: 3259-3603 bp Feature: gene Location: 8658-8942 bp Feature: domain Description: InsE Location: 8670-8934 bp Feature: domain Description: InsE Location: 8670-8934 bp Feature: gene Location: 9426-10523 bp Feature: domain Description: OmpA Location: 9879-10494 bp Feature: domain Description: OmpA Location: 9879-1 0494 bp Feature: gene Location: 10925-12076 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11303-11741 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 303-1 1 741 bp Feature: gene Location: 12301-12447 bp Feature: gene Location: 12538-12735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BID_1 (smart00634), RVT-UG4, InsE (COG2963), OmpA (pfam00691)

Seq: RXNV01000004.1 (318714 bp)
Overview 1 RT 1: 161116-166059 bp Neighborhood of RT #1 [161116, 166076] YbbA RVT_N RVT-GII GIIM CC3_like_SDR_a FrsA FrsA Feature: gene Location: 161116-161793 bp Feature: domain Description: YbbA Location: 161128-161767 bp Feature: domain Description: YbbA Location: 16112 8-161767 bp Feature: gene Location: 161977-162288 bp Feature: gene Location: 162312-163826 bp Feature: domain Description: RVT_N Location: 162402-162645 bp Feature: domain Description: RVT_N Location: 162 402 -162 645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162690-163317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 690-163317 bp Feature: domain Description: GIIM Note: maturase Location: 163374-163602 bp Feature: domain Description: GIIM Note: maturase Location: 163374-163602 bp Feature: gene Location: 164470-165132 bp Feature: domain Description: CC3_like_SDR_a Location: 164476-165091 bp Feature: domain Description: CC3_like_SDR_a Location: 164476-165091 bp Feature: gene Location: 165129-166076 bp Feature: domain Description: FrsA Location: 165153-165507 bp Feature: domain Description: FrsA Location: 165153-165507 bp Feature: domain Description: FrsA Location: 165828-166059 bp Feature: domain Description: FrsA Location: 16582 8-166059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbbA (COG4181), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), CC3_like_SDR_a (cd05250), FrsA (COG1073)

Seq: RXNV01000024.1 (36526 bp)
Overview 1 RT 1: 27819-31373 bp Neighborhood of RT #1 [27819, 31492] COG3547 RVT_N RVT-GII GIIM SR_ResInv Feature: gene Location: 27819-28523 bp Feature: domain Description: COG3547 Location: 27825-28485 bp Feature: domain Description: COG3 547 Location: 27825-28485 bp Feature: gene Location: 28765-28902 bp Feature: gene Location: 29423-30454 bp Feature: domain Description: RVT_N Location: 29630-29873 bp Feature: domain Description: RVT_N Location: 2963 0-29873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29918-30353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29918-3 03 53 bp Feature: gene Location: 30564-31052 bp Feature: domain Description: GIIM Note: maturase Location: 30603-30828 bp Feature: domain Description: GIIM Note: maturase Location: 3 0603 -3 0828 bp Feature: gene Location: 31064-31492 bp Feature: domain Description: SR_ResInv Location: 31079-31373 bp Feature: domain Description: SR_ResInv Location: 3 1079-3 13 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SR_ResInv (cd03768)