myRT

myRT report for GCA_003967435.1_ASM396743v1

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Seq: BIFL01000319.1 (535 bp)
Overview 1 RT 1: 3-129 bp Neighborhood of RT #1 [3, 533] RVT-CRISPR-like Feature: gene Location: 3-533 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 6-129 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 6-1 29 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: BIFL01000291.1 (864 bp)
Overview 1 RT 1: 2-862 bp Neighborhood of RT #1 [2, 862] RVT-Retrons Feature: gene Location: 2-430 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 182-383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 182 -383 bp Feature: gene Location: 545-862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: BIFL01000004.1 (130300 bp)
Overview 1 RT 1: 91407-98275 bp Neighborhood of RT #1 [91407, 98277] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 91407-92135 bp Feature: domain Description: FimC Location: 91455-92118 bp Feature: domain Description: FimC Location: 91455-92118 bp Feature: gene Location: 92167-94776 bp Feature: domain Description: FimD Location: 92224-94765 bp Feature: domain Description: FimD Location: 92224-94765 bp Feature: gene Location: 94776-96854 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 95184-95628 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 95184-95628 bp Feature: gene Location: 96911-97351 bp Feature: domain Description: Integrase_1 Location: 96917-97133 bp Feature: domain Description: Integrase_1 Location: 96917-9713 3 bp Feature: gene Location: 97612-98277 bp Feature: domain Description: INT_P4_C Location: 97717-98275 bp Feature: domain Description: INT_P4_C Location: 97717-98275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: BIFL01000106.1 (16132 bp)
Overview 1 RT 1: 219-4361 bp Neighborhood of RT #1 [219, 4361] umuC PRK10276 RVT-GII Feature: gene Location: 219-1484 bp Feature: domain Description: umuC Location: 222-1482 bp Feature: domain Description: umuC Location: 222-14 82 bp Feature: gene Location: 1486-1905 bp Feature: domain Description: PRK10276 Location: 1489-1900 bp Feature: domain Description: PRK10276 Location: 14 89-1900 bp Feature: gene Location: 1984-3471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2389-3079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2389-3079 bp Feature: gene Location: 3496-3912 bp Feature: gene Location: 4173-4361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII