myRT

myRT report for GCA_003967515.1_ASM396751v1

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Seq: BIFQ01000001.1 (6133338 bp)
Overview 1 RT 1: 961573-967367 bp Neighborhood of RT #1 [961573, 967375] KOG2565 RVT-GII Intron_maturas2 HNHc Transposase_mut Feature: gene Location: 961573-962745 bp Feature: domain Description: KOG2565 Location: 961588-962722 bp Feature: domain Description: KOG2565 Location: 961 588-962722 bp Feature: gene Location: 963116-963337 bp Feature: gene Location: 963418-965277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963679-964474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963679-964474 bp Feature: domain Description: Intron_maturas2 Location: 964579-964813 bp Feature: domain Description: Intron_maturas2 Location: 964579-96481 3 bp Feature: domain Description: HNHc Note: nucleases Location: 965002-965161 bp Feature: domain Description: HNHc Note: nucleases Location: 965002-9651 61 bp Feature: gene Location: 965651-966070 bp Feature: gene Location: 966404-967375 bp Feature: domain Description: Transposase_mut Location: 966518-967367 bp Feature: domain Description: Transposase_mut Location: 96651 8-967367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BIFQ01000002.1 (2748323 bp)
Overview 1 RT 1: 48880-53861 bp 2 RT 2: 1246887-1251462 bp 3 RT 3: 1526125-1531362 bp 4 RT 4: 1811058-1816621 bp 5 RT 5: 1934065-1940769 bp 6 RT 6: 2061982-2066603 bp 7 RT 7: 2635316-2643264 bp Neighborhood of RT #1 [48880, 53872] SnoaL_2 RRXRR RVT-GII Intron_maturas2 HNHc HNH IclR Neighborhood of RT #2 [1246887, 1251629] BcsQ RVT-GII Intron_maturas2 HTH_17 Neighborhood of RT #3 [1526125, 1531415] Y1_Tnp DDE_Tnp_1_6 RVT-GII Intron_maturas2 HNHc COG3666 MFS_MefA_like Neighborhood of RT #4 [1811058, 1816632] DUF4291 DUF772 RVT-GII Intron_maturas2 HNHc DDE_Tnp_1_6 Y1_Tnp Neighborhood of RT #5 [1934065, 1940975] RibD_C APH RVT_N RVT-GII GIIM HNH InsQ AcrR Neighborhood of RT #6 [2061982, 2066698] Y1_Tnp COG3666 RVT-GII Intron_maturas2 HNHc DDE_Tnp_1_6 Neighborhood of RT #7 [2635316, 2643266] DDE_Tnp_ISL3 MFS_MefA_like RVT-GII Intron_maturas2 HNHc RVT_N RVT-GII YkfC HNH Rve Feature: gene Location: 48880-49203 bp Feature: domain Description: SnoaL_2 Location: 48913-49186 bp Feature: domain Description: SnoaL_2 Location: 48913-49186 bp Feature: gene Location: 49512-50231 bp Feature: domain Description: RRXRR Location: 49524-50046 bp Feature: domain Description: RRXRR Location: 4952 4-50046 bp Feature: gene Location: 50675-52582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50957-51758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50957-51758 bp Feature: domain Description: Intron_maturas2 Location: 51902-52124 bp Feature: domain Description: Intron_maturas2 Location: 51902 -52 12 4 bp Feature: domain Description: HNHc Note: nucleases Location: 52310-52451 bp Feature: domain Description: HNHc Note: nucleases Location: 52 310-52 451 bp Feature: gene Location: 52576-53310 bp Feature: domain Description: HNH Note: nucleases Location: 52621-52717 bp Feature: domain Description: HNH Note: nucleases Location: 52 62 1-52 717 bp Feature: gene Location: 53573-53872 bp Feature: domain Description: IclR Location: 53621-53861 bp Feature: domain Description: IclR Location: 5362 1-53861 bp Feature: gene Location: 1246887-1247558 bp Feature: gene Location: 1247542-1248381 bp Feature: domain Description: BcsQ Location: 1247659-1248373 bp Feature: domain Description: BcsQ Location: 12 47659-12 48373 bp Feature: gene Location: 1248371-1250236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1248638-1249433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 48638-12 49433 bp Feature: domain Description: Intron_maturas2 Location: 1249595-1249805 bp Feature: domain Description: Intron_maturas2 Location: 12 49595-12 49805 bp Feature: gene Location: 1250291-1250434 bp Feature: gene Location: 1251330-1251629 bp Feature: domain Description: HTH_17 Location: 1251387-1251462 bp Feature: domain Description: HTH_17 Location: 12 51387-12 51462 bp Feature: gene Location: 1526125-1526520 bp Feature: domain Description: Y1_Tnp Location: 1526164-1526509 bp Feature: domain Description: Y1_Tnp Location: 152 6164-152 6509 bp Feature: gene Location: 1526649-1528100 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1527639-1528005 bp Feature: domain Description: DDE_Tnp_1_6 Location: 152 7639-152 8005 bp Feature: gene Location: 1528147-1529943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1528408-1529206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 8408-152 92 06 bp Feature: domain Description: Intron_maturas2 Location: 1529320-1529551 bp Feature: domain Description: Intron_maturas2 Location: 152 932 0-152 9551 bp Feature: domain Description: HNHc Note: nucleases Location: 1529707-1529896 bp Feature: domain Description: HNHc Note: nucleases Location: 152 9707-152 9896 bp Feature: gene Location: 1530413-1530757 bp Feature: domain Description: COG3666 Location: 1530449-1530698 bp Feature: domain Description: COG3666 Location: 1530449-1530698 bp Feature: gene Location: 1530924-1531415 bp Feature: domain Description: MFS_MefA_like Location: 1530930-1531362 bp Feature: domain Description: MFS_MefA_like Location: 1530930-1531362 bp Feature: gene Location: 1811058-1811684 bp Feature: domain Description: DUF4291 Location: 1811112-1811628 bp Feature: domain Description: DUF42 91 Location: 1811112 -181162 8 bp Feature: gene Location: 1811970-1812344 bp Feature: domain Description: DUF772 Location: 1812159-1812279 bp Feature: domain Description: DUF772 Location: 1812 159-1812 2 79 bp Feature: gene Location: 1812814-1814610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1813075-1813873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1813075-1813873 bp Feature: domain Description: Intron_maturas2 Location: 1813987-1814218 bp Feature: domain Description: Intron_maturas2 Location: 1813987-18142 18 bp Feature: domain Description: HNHc Note: nucleases Location: 1814374-1814563 bp Feature: domain Description: HNHc Note: nucleases Location: 1814374-1814563 bp Feature: gene Location: 1814657-1816102 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1815647-1816013 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1815647-1816013 bp Feature: gene Location: 1816198-1816632 bp Feature: domain Description: Y1_Tnp Location: 1816276-1816621 bp Feature: domain Description: Y1_Tnp Location: 18162 76-181662 1 bp Feature: gene Location: 1934065-1934646 bp Feature: domain Description: RibD_C Location: 1934074-1934614 bp Feature: domain Description: RibD_C Location: 1934074-1934614 bp Feature: gene Location: 1934907-1935923 bp Feature: domain Description: APH Location: 1935171-1935729 bp Feature: domain Description: APH Location: 1935171-193572 9 bp Feature: gene Location: 1936750-1938513 bp Feature: domain Description: RVT_N Location: 1936852-1937095 bp Feature: domain Description: RVT_N Location: 1936852 -1937095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1937140-1937776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1937140-1937776 bp Feature: domain Description: GIIM Note: maturase Location: 1937833-1938067 bp Feature: domain Description: GIIM Note: maturase Location: 1937833-1938067 bp Feature: domain Description: HNH Note: nucleases Location: 1938319-1938457 bp Feature: domain Description: HNH Note: nucleases Location: 1938319-1938457 bp Feature: gene Location: 1938519-1939655 bp Feature: domain Description: InsQ Location: 1938651-1939605 bp Feature: domain Description: InsQ Location: 1938651-1939605 bp Feature: gene Location: 1940310-1940975 bp Feature: domain Description: AcrR Location: 1940361-1940769 bp Feature: domain Description: AcrR Location: 1940361-1940769 bp Feature: gene Location: 2061982-2062377 bp Feature: domain Description: Y1_Tnp Location: 2062021-2062366 bp Feature: domain Description: Y1_Tnp Location: 2 062 02 1-2 062 366 bp Feature: gene Location: 2062560-2062934 bp Feature: domain Description: COG3666 Location: 2062626-2062875 bp Feature: domain Description: COG3666 Location: 2 062 62 6-2 062 875 bp Feature: gene Location: 2063404-2065200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2063665-2064463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 063665-2 064463 bp Feature: domain Description: Intron_maturas2 Location: 2064577-2064808 bp Feature: domain Description: Intron_maturas2 Location: 2 064577-2 064808 bp Feature: domain Description: HNHc Note: nucleases Location: 2064964-2065153 bp Feature: domain Description: HNHc Note: nucleases Location: 2 064964-2 065153 bp Feature: gene Location: 2065247-2066266 bp Feature: gene Location: 2066339-2066698 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2066348-2066603 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2 066348-2 066603 bp Feature: gene Location: 2635316-2636464 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2636153-2636393 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2 636153-2 636393 bp Feature: gene Location: 2636616-2637857 bp Feature: domain Description: MFS_MefA_like Location: 2636688-2637822 bp Feature: domain Description: MFS_MefA_like Location: 2 636688-2 63782 2 bp Feature: gene Location: 2638214-2640073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2638475-2639270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 638475-2 6392 70 bp Feature: domain Description: Intron_maturas2 Location: 2639375-2639609 bp Feature: domain Description: Intron_maturas2 Location: 2 639375-2 639609 bp Feature: domain Description: HNHc Note: nucleases Location: 2639798-2639957 bp Feature: domain Description: HNHc Note: nucleases Location: 2 639798-2 639957 bp Feature: gene Location: 2640494-2642377 bp Feature: domain Description: RVT_N Location: 2640563-2640806 bp Feature: domain Description: RVT_N Location: 2 640563-2 640806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2640863-2641511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 640863-2 641511 bp Feature: domain Description: YkfC Location: 2641667-2641853 bp Feature: domain Description: YkfC Location: 2 641667-2 641853 bp Feature: domain Description: HNH Note: nucleases Location: 2642054-2642192 bp Feature: domain Description: HNH Note: nucleases Location: 2 642 054-2 642 192 bp Feature: gene Location: 2642646-2642921 bp Feature: gene Location: 2643102-2643266 bp Feature: domain Description: Rve Location: 2643129-2643264 bp Feature: domain Description: Rve Location: 2 64312 9-2 6432 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT