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myRT report for GCA_003968475.1_ASM396847v1
Download annotations/find similar RTs
Seq:
RXTD01000005.1 (582298 bp)
Overview
1
RT 1: 486024-496320 bp
2
RT 2: 512575-521410 bp
Neighborhood of RT #1 [486024, 496322]
COG3177
RVT_N
RVT-GII
GIIM
HNH
PBP2_BvgS_HisK_like
PRK09776
sensory_box
PAS_9
PRK10060
PRK05658
Neighborhood of RT #2 [512575, 521439]
PRK10770
LptD
RVT_N
RVT-GII
YkfC
HNH
COG3178
NTP_transferase_like_1
Feature: gene
Location: 486024-487145 bp
Feature: domain
Description: COG3177
Location: 486042-487134 bp
Feature: domain
Description: COG31 77
Location: 486042-4871 34 bp
Feature: gene
Location: 487407-487556 bp
Feature: gene
Location: 487859-489544 bp
Feature: domain
Description: RVT_N
Location: 487916-488156 bp
Feature: domain
Description: RVT_N
Location: 48791 6-4881 56 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 488204-488840 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 488204-488840 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 488894-489125 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 488894-4891 25 bp
Feature: domain
Description: HNH
Note: nucleases
Location: 489377-489515 bp
Feature: domain
Description: HNH
Note: nucleases
Location: 489377-48951 5 bp
Feature: gene
Location: 490625-494362 bp
Feature: domain
Description: PBP2_BvgS_HisK_like
Location: 490733-491390 bp
Feature: domain
Description: PBP2_BvgS_HisK_like
Location: 490733-491 390 bp
Feature: domain
Description: PRK09776
Location: 491603-491924 bp
Feature: domain
Description: PRK09776
Location: 491 603-491 924 bp
Feature: domain
Description: sensory_box
Location: 491933-492293 bp
Feature: domain
Description: sensory_box
Location: 491 933-492293 bp
Feature: domain
Description: PAS_9
Location: 492341-492647 bp
Feature: domain
Description: PAS_9
Location: 492341 -492647 bp
Feature: domain
Description: PRK10060
Location: 492665-494312 bp
Feature: domain
Description: PRK1 0060
Location: 492665-49431 2 bp
Feature: gene
Location: 494469-496322 bp
Feature: domain
Description: PRK05658
Location: 494481-496320 bp
Feature: domain
Description: PRK05658
Location: 494481 -496320 bp
Feature: gene
Location: 512575-513789 bp
Feature: domain
Description: PRK10770
Location: 512587-513781 bp
Feature: domain
Description: PRK1 0770
Location: 51 2587-51 3781 bp
Feature: gene
Location: 513848-516634 bp
Feature: domain
Description: LptD
Location: 514193-516620 bp
Feature: domain
Description: LptD
Location: 51 41 93-51 6620 bp
Feature: gene
Location: 516767-518479 bp
Feature: domain
Description: RVT_N
Location: 516824-517067 bp
Feature: domain
Description: RVT_N
Location: 51 6824-51 7067 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 517112-517748 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 51 71 1 2-51 7748 bp
Feature: domain
Description: YkfC
Location: 517958-518108 bp
Feature: domain
Description: YkfC
Location: 51 7958-51 81 08 bp
Feature: domain
Description: HNH
Note: nucleases
Location: 518285-518423 bp
Feature: domain
Description: HNH
Note: nucleases
Location: 51 8285-51 8423 bp
Feature: gene
Location: 519752-520768 bp
Feature: domain
Description: COG3178
Location: 519755-520754 bp
Feature: domain
Description: COG31 78
Location: 51 9755-520754 bp
Feature: gene
Location: 520765-521439 bp
Feature: domain
Description: NTP_transferase_like_1
Location: 520771-521410 bp
Feature: domain
Description: NTP_transferase_like_1
Location: 520771 -521 41 0 bp
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