myRT

myRT report for GCA_003969065.1_ASM396906v1

Download annotations/find similar RTs

Seq: RXUU01000006.1 (39425 bp)
Overview 1 RT 1: 364-7712 bp Neighborhood of RT #1 [364, 7999] HTH_21 RVT-UG5 COG4127 restrict_AAA_1 restrict_AAA_1 Feature: gene Location: 364-594 bp Feature: domain Description: HTH_21 Location: 484-586 bp Feature: domain Description: HTH_21 Location: 484-586 bp Feature: gene Location: 681-809 bp Feature: gene Location: 901-3948 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1399-1900 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 399-1 900 bp Feature: gene Location: 4318-5310 bp Feature: domain Description: COG4127 Location: 4324-5299 bp Feature: domain Description: COG41 27 Location: 4324-5299 bp Feature: gene Location: 6248-7999 bp Feature: domain Description: restrict_AAA_1 Location: 6251-6998 bp Feature: domain Description: restrict_AAA_1 Location: 6251 -6998 bp Feature: domain Description: restrict_AAA_1 Location: 7325-7712 bp Feature: domain Description: restrict_AAA_1 Location: 7325-771 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-UG5, COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), restrict_AAA_1 (TIGR04435)

Seq: RXUU01000067.1 (139809 bp)
Overview 1 RT 1: 17269-21462 bp Neighborhood of RT #1 [17269, 21500] PinE IS5 RVT-GII GIIM IS5 OsmC Feature: gene Location: 17269-17829 bp Feature: domain Description: PinE Location: 17287-17818 bp Feature: domain Description: PinE Location: 172 87-17818 bp Feature: gene Location: 18160-18699 bp Feature: domain Description: IS5 Location: 18349-18676 bp Feature: domain Description: IS5 Location: 18349-18676 bp Feature: gene Location: 19192-20460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19405-20062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19405-2 0062 bp Feature: domain Description: GIIM Note: maturase Location: 20140-20362 bp Feature: domain Description: GIIM Note: maturase Location: 2 0140-2 0362 bp Feature: gene Location: 20370-20990 bp Feature: domain Description: IS5 Location: 20520-20961 bp Feature: domain Description: IS5 Location: 2 052 0-2 0961 bp Feature: gene Location: 21141-21500 bp Feature: domain Description: OsmC Location: 21360-21462 bp Feature: domain Description: OsmC Location: 2 1360-2 1462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), IS5 (COG3039), RVT-GII, GIIM (pfam08388), OsmC (pfam02566)