myRT

myRT report for GCA_003969105.1_ASM396910v1

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Seq: RXUW01000108.1 (42937 bp)
Overview 1 RT 1: 26340-35293 bp Neighborhood of RT #1 [26340, 35346] AAA_15 AAA_15 RVT-UG5 YeeA TIGR02687 Feature: gene Location: 26340-27482 bp Feature: domain Description: AAA_15 Location: 26343-26484 bp Feature: domain Description: AAA_1 5 Location: 26343-26484 bp Feature: domain Description: AAA_15 Location: 27165-27276 bp Feature: domain Description: AAA_1 5 Location: 271 65-27276 bp Feature: gene Location: 27482-28039 bp Feature: gene Location: 28036-31056 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 28531-29005 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 28531 -29005 bp Feature: gene Location: 31053-32831 bp Feature: domain Description: YeeA Location: 31788-32694 bp Feature: domain Description: YeeA Location: 31 788-32694 bp Feature: gene Location: 32839-35346 bp Feature: domain Description: TIGR02687 Location: 32854-35293 bp Feature: domain Description: TIGR02687 Location: 32854-35293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-UG5, YeeA (COG1002), TIGR02687 (TIGR02687 family protein)

Seq: RXUW01000011.1 (248453 bp)
Overview 1 RT 1: 49219-58090 bp 2 RT 2: 74355-83648 bp Neighborhood of RT #1 [49219, 58098] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74355, 83648] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH HipA_So_like Feature: gene Location: 49219-49893 bp Feature: domain Description: NTP_transferase_like_1 Location: 49225-49864 bp Feature: domain Description: NTP_transferase_like_1 Location: 492 2 5-49864 bp Feature: gene Location: 49890-50906 bp Feature: domain Description: COG3178 Location: 49893-50892 bp Feature: domain Description: COG3178 Location: 49893-50892 bp Feature: gene Location: 52179-53891 bp Feature: domain Description: RVT_N Location: 52236-52479 bp Feature: domain Description: RVT_N Location: 52 2 36-52 479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52524-53160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 52 4-53160 bp Feature: domain Description: YkfC Location: 53367-53520 bp Feature: domain Description: YkfC Location: 53367-5352 0 bp Feature: domain Description: HNH Note: nucleases Location: 53697-53835 bp Feature: domain Description: HNH Note: nucleases Location: 53697-53835 bp Feature: gene Location: 54024-56825 bp Feature: domain Description: LptD Location: 54219-56811 bp Feature: domain Description: LptD Location: 542 19-56811 bp Feature: gene Location: 56884-58098 bp Feature: domain Description: PRK10770 Location: 56896-58090 bp Feature: domain Description: PRK10770 Location: 56896-58090 bp Feature: gene Location: 74355-76208 bp Feature: domain Description: PRK05658 Location: 74367-76206 bp Feature: domain Description: PRK05658 Location: 74367-762 06 bp Feature: gene Location: 76315-80052 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76423-77080 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 7642 3-77080 bp Feature: domain Description: PRK09776 Location: 77293-77764 bp Feature: domain Description: PRK09776 Location: 772 93-77764 bp Feature: domain Description: PAS Location: 77809-78346 bp Feature: domain Description: PAS Location: 77809-78346 bp Feature: domain Description: PRK10060 Location: 78355-80002 bp Feature: domain Description: PRK10060 Location: 78355-80002 bp Feature: gene Location: 81133-82818 bp Feature: domain Description: RVT_N Location: 81190-81430 bp Feature: domain Description: RVT_N Location: 81190-81430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81478-82114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81478-82 114 bp Feature: domain Description: GIIM Note: maturase Location: 82168-82399 bp Feature: domain Description: GIIM Note: maturase Location: 82 168-82 399 bp Feature: domain Description: HNH Note: nucleases Location: 82651-82789 bp Feature: domain Description: HNH Note: nucleases Location: 82 651-82 789 bp Feature: gene Location: 83122-83439 bp Feature: domain Description: HipA_So_like Location: 83161-83401 bp Feature: domain Description: HipA_So_like Location: 83161-83401 bp Feature: gene Location: 83454-83648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), HipA_So_like (cd17809)