myRT

myRT report for GCA_003970065.1_ASM397006v1

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Seq: RXWL01000114.1 (38009 bp)
Overview 1 RT 1: 31415-37902 bp Neighborhood of RT #1 [31415, 38006] restrict_AAA_1 restrict_AAA_1 COG4127 RVT-UG5 nitrilase Feature: gene Location: 31415-33166 bp Feature: domain Description: restrict_AAA_1 Location: 31418-32165 bp Feature: domain Description: restrict_AAA_1 Location: 31 41 8-321 65 bp Feature: domain Description: restrict_AAA_1 Location: 32492-32879 bp Feature: domain Description: restrict_AAA_1 Location: 32492-32879 bp Feature: gene Location: 34104-35096 bp Feature: domain Description: COG4127 Location: 34110-35085 bp Feature: domain Description: COG41 27 Location: 341 1 0-35085 bp Feature: gene Location: 35466-38006 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 35469-35958 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 35469-35958 bp Feature: domain Description: nitrilase Location: 37320-37902 bp Feature: domain Description: nitrilase Location: 37320-37902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT restrict_AAA_1 (TIGR04435), COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), RVT-UG5, nitrilase (cl11424)

Seq: RXWL01000198.1 (2413 bp)
Overview 1 RT 1: 87-2410 bp Neighborhood of RT #1 [87, 2410] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 87-1805 bp Feature: domain Description: RVT_N Location: 144-381 bp Feature: domain Description: RVT_N Location: 144-381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432 -1083 bp Feature: domain Description: GIIM Note: maturase Location: 1137-1368 bp Feature: domain Description: GIIM Note: maturase Location: 1137-1368 bp Feature: domain Description: HNHc Note: nucleases Location: 1602-1758 bp Feature: domain Description: HNHc Note: nucleases Location: 1602 -1758 bp Feature: gene Location: 2075-2203 bp Feature: gene Location: 2234-2410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)