myRT

myRT report for GCA_003973785.1_ASM397378v1

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Seq: RWZI01000037.1 (27710 bp)
Overview 1 RT 1: 24746-27556 bp Neighborhood of RT #1 [24746, 27591] AlpA TnpB_IS66 RVT-GII GIIM TnpB_IS66 Feature: gene Location: 24746-24991 bp Feature: domain Description: AlpA Location: 24776-24980 bp Feature: domain Description: AlpA Location: 24776-24980 bp Feature: gene Location: 25371-25574 bp Feature: domain Description: TnpB_IS66 Location: 25401-25551 bp Feature: domain Description: TnpB_IS66 Location: 25401 -25551 bp Feature: gene Location: 26086-27354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26290-26947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26290-26947 bp Feature: domain Description: GIIM Note: maturase Location: 27025-27247 bp Feature: domain Description: GIIM Note: maturase Location: 27025-27247 bp Feature: gene Location: 27388-27591 bp Feature: domain Description: TnpB_IS66 Location: 27412-27556 bp Feature: domain Description: TnpB_IS66 Location: 2741 2-27556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RWZI01000004.1 (352844 bp)
Overview 1 RT 1: 141323-147920 bp Neighborhood of RT #1 [141323, 147928] GRX_bact PspE RVT_N RVT-GII GIIM HNHc pgm_bpd_ind YdiL Feature: gene Location: 141323-141577 bp Feature: domain Description: GRX_bact Location: 141335-141569 bp Feature: domain Description: GRX_bact Location: 141335-141569 bp Feature: gene Location: 141579-141998 bp Feature: domain Description: PspE Location: 141696-141996 bp Feature: domain Description: PspE Location: 141696-141996 bp Feature: gene Location: 142162-143844 bp Feature: domain Description: RVT_N Location: 142171-142414 bp Feature: domain Description: RVT_N Location: 142 171-142 414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142462-143113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 462 -143113 bp Feature: domain Description: GIIM Note: maturase Location: 143191-143419 bp Feature: domain Description: GIIM Note: maturase Location: 143191-143419 bp Feature: domain Description: HNHc Note: nucleases Location: 143647-143803 bp Feature: domain Description: HNHc Note: nucleases Location: 143647-143803 bp Feature: gene Location: 145251-146798 bp Feature: domain Description: pgm_bpd_ind Location: 145269-146787 bp Feature: domain Description: pgm_bpd_ind Location: 1452 69-146787 bp Feature: gene Location: 147110-147928 bp Feature: domain Description: YdiL Location: 147170-147920 bp Feature: domain Description: YdiL Location: 147170-14792 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RWZI01000020.1 (126482 bp)
Overview 1 RT 1: 83745-93934 bp Neighborhood of RT #1 [83745, 94038] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH int HTH_XRE Feature: gene Location: 83745-85598 bp Feature: domain Description: PRK05658 Location: 83757-85596 bp Feature: domain Description: PRK05658 Location: 83 757-85596 bp Feature: gene Location: 85705-89442 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85813-86470 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85813 -86470 bp Feature: domain Description: PRK09776 Location: 86683-87154 bp Feature: domain Description: PRK09776 Location: 86683 -87154 bp Feature: domain Description: PAS Location: 87199-87736 bp Feature: domain Description: PAS Location: 87199-8773 6 bp Feature: domain Description: PRK10060 Location: 87745-89392 bp Feature: domain Description: PRK10060 Location: 87745-893 92 bp Feature: gene Location: 90523-92208 bp Feature: domain Description: RVT_N Location: 90580-90820 bp Feature: domain Description: RVT_N Location: 90580-90820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90868-91504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90868-91504 bp Feature: domain Description: GIIM Note: maturase Location: 91558-91789 bp Feature: domain Description: GIIM Note: maturase Location: 91558-91789 bp Feature: domain Description: HNH Note: nucleases Location: 92041-92179 bp Feature: domain Description: HNH Note: nucleases Location: 92041-92179 bp Feature: gene Location: 92325-93509 bp Feature: domain Description: int Location: 92328-93345 bp Feature: domain Description: int Location: 923 28-93 3 45 bp Feature: gene Location: 93514-94038 bp Feature: domain Description: HTH_XRE Location: 93820-93934 bp Feature: domain Description: HTH_XRE Location: 93 820-93 93 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT