myRT

myRT report for GCA_003974025.1_ASM397402v1

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Seq: RXAH01000004.1 (455440 bp)
Overview 1 RT 1: 451347-455439 bp Neighborhood of RT #1 [451347, 455439] HxlR PRK06333 RVT-UG2 Feature: gene Location: 451347-451853 bp Feature: domain Description: HxlR Location: 451371-451689 bp Feature: domain Description: HxlR Location: 451 371 -451 689 bp Feature: gene Location: 451962-453230 bp Feature: domain Description: PRK06333 Location: 451968-453225 bp Feature: domain Description: PRK06333 Location: 451 968-453225 bp Feature: gene Location: 453729-455075 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 453978-454764 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 453978-454764 bp Feature: gene Location: 455308-455439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2

Seq: RXAH01000009.1 (258365 bp)
Overview 1 RT 1: 252537-258066 bp Neighborhood of RT #1 [252537, 258362] CHD CHD RVT-GII GIIM DUF772 Feature: gene Location: 252537-254081 bp Feature: domain Description: CHD Location: 252753-253167 bp Feature: domain Description: CHD Location: 2 52 753-2 53167 bp Feature: domain Description: CHD Location: 253395-253884 bp Feature: domain Description: CHD Location: 2 53395-2 53884 bp Feature: gene Location: 255165-255344 bp Feature: gene Location: 256076-257344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256289-256946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 562 89-2 56946 bp Feature: domain Description: GIIM Note: maturase Location: 257024-257246 bp Feature: domain Description: GIIM Note: maturase Location: 2 5702 4-2 572 46 bp Feature: gene Location: 257733-258362 bp Feature: domain Description: DUF772 Location: 257871-258066 bp Feature: domain Description: DUF772 Location: 2 57871-2 58066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)

Seq: RXAH01000017.1 (133389 bp)
Overview 1 RT 1: 48316-58622 bp 2 RT 2: 74880-83718 bp Neighborhood of RT #1 [48316, 58624] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [74880, 83747] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 48316-49437 bp Feature: domain Description: COG3177 Location: 48334-49426 bp Feature: domain Description: COG3 177 Location: 483 3 4-49426 bp Feature: gene Location: 49696-49833 bp Feature: gene Location: 50161-51846 bp Feature: domain Description: RVT_N Location: 50218-50458 bp Feature: domain Description: RVT_N Location: 50218-50458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50506-51142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50506-51142 bp Feature: domain Description: GIIM Note: maturase Location: 51196-51427 bp Feature: domain Description: GIIM Note: maturase Location: 51196-51427 bp Feature: domain Description: HNH Note: nucleases Location: 51679-51817 bp Feature: domain Description: HNH Note: nucleases Location: 51679-51817 bp Feature: gene Location: 52927-56664 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 53035-53692 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 53 03 5-53 692 bp Feature: domain Description: PRK09776 Location: 53905-54376 bp Feature: domain Description: PRK09776 Location: 53 905-543 76 bp Feature: domain Description: PAS Location: 54418-54958 bp Feature: domain Description: PAS Location: 54418-54958 bp Feature: domain Description: PRK10060 Location: 54967-56614 bp Feature: domain Description: PRK10060 Location: 54967-56614 bp Feature: gene Location: 56771-58624 bp Feature: domain Description: PRK05658 Location: 56783-58622 bp Feature: domain Description: PRK05658 Location: 56783 -58622 bp Feature: gene Location: 74880-76094 bp Feature: domain Description: PRK10770 Location: 74892-76086 bp Feature: domain Description: PRK10770 Location: 74892-76086 bp Feature: gene Location: 76153-78942 bp Feature: domain Description: LptD Location: 76348-78928 bp Feature: domain Description: LptD Location: 763 48-78928 bp Feature: gene Location: 79075-80787 bp Feature: domain Description: RVT_N Location: 79132-79375 bp Feature: domain Description: RVT_N Location: 7913 2-793 75 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79420-80056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79420-80056 bp Feature: domain Description: YkfC Location: 80266-80416 bp Feature: domain Description: YkfC Location: 80266-80416 bp Feature: domain Description: HNH Note: nucleases Location: 80593-80731 bp Feature: domain Description: HNH Note: nucleases Location: 80593 -8073 1 bp Feature: gene Location: 82060-83076 bp Feature: domain Description: COG3178 Location: 82063-83062 bp Feature: domain Description: COG3 178 Location: 82063 -83 062 bp Feature: gene Location: 83073-83747 bp Feature: domain Description: NTP_transferase_like_1 Location: 83079-83718 bp Feature: domain Description: NTP_transferase_like_1 Location: 83 079-83 718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)
PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)