myRT

myRT report for GCA_003974615.1_ASM397461v1

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Seq: RXAS01000007.1 (773878 bp)
Overview 1 RT 1: 646777-652514 bp Neighborhood of RT #1 [646777, 652514] KOG0389 SF2_C_SNF HNHc RVT_N RVT-GII GIIM HNHc DEXHc_Snf Feature: gene Location: 646777-648036 bp Feature: domain Description: KOG0389 Location: 646807-646930 bp Feature: domain Description: KOG0389 Location: 646807-646930 bp Feature: domain Description: SF2_C_SNF Location: 647476-647872 bp Feature: domain Description: SF2_C_SNF Location: 647476-647872 bp Feature: gene Location: 648104-648340 bp Feature: domain Description: HNHc Note: nucleases Location: 648137-648293 bp Feature: domain Description: HNHc Note: nucleases Location: 6481 37-648293 bp Feature: gene Location: 648403-650121 bp Feature: domain Description: RVT_N Location: 648460-648697 bp Feature: domain Description: RVT_N Location: 648460-648697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 648748-649399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 648748-649399 bp Feature: domain Description: GIIM Note: maturase Location: 649453-649684 bp Feature: domain Description: GIIM Note: maturase Location: 649453-649684 bp Feature: domain Description: HNHc Note: nucleases Location: 649918-650074 bp Feature: domain Description: HNHc Note: nucleases Location: 64991 8-650074 bp Feature: gene Location: 651017-652072 bp Feature: domain Description: DEXHc_Snf Location: 651236-651491 bp Feature: domain Description: DEXHc_Snf Location: 651 236-651 491 bp Feature: gene Location: 652209-652514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RXAS01000004.1 (573958 bp)
Overview 1 RT 1: 486845-499329 bp 2 RT 2: 515588-524446 bp Neighborhood of RT #1 [486845, 499331] IMPa_N_2 IMPa_helical Peptidase_M60 HipA_C RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [515588, 524475] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 486845-489571 bp Feature: domain Description: IMPa_N_2 Location: 487052-487634 bp Feature: domain Description: IMPa_N_2 Location: 487052 -487634 bp Feature: domain Description: IMPa_helical Location: 487715-488042 bp Feature: domain Description: IMPa_helical Location: 487715-488042 bp Feature: domain Description: Peptidase_M60 Location: 488486-489416 bp Feature: domain Description: Peptidase_M60 Location: 488486-489416 bp Feature: gene Location: 490247-490564 bp Feature: domain Description: HipA_C Location: 490280-490460 bp Feature: domain Description: HipA_C Location: 4902 80-490460 bp Feature: gene Location: 490868-492553 bp Feature: domain Description: RVT_N Location: 490925-491165 bp Feature: domain Description: RVT_N Location: 49092 5-491165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491213-491849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4912 13-491849 bp Feature: domain Description: GIIM Note: maturase Location: 491903-492134 bp Feature: domain Description: GIIM Note: maturase Location: 491903-492 134 bp Feature: domain Description: HNH Note: nucleases Location: 492386-492524 bp Feature: domain Description: HNH Note: nucleases Location: 492 386-492 52 4 bp Feature: gene Location: 493634-497371 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 493742-494399 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 493742 -494399 bp Feature: domain Description: PRK09776 Location: 494612-495083 bp Feature: domain Description: PRK09776 Location: 494612 -495083 bp Feature: domain Description: PAS Location: 495128-495665 bp Feature: domain Description: PAS Location: 49512 8-495665 bp Feature: domain Description: PRK10060 Location: 495674-497321 bp Feature: domain Description: PRK10060 Location: 495674-49732 1 bp Feature: gene Location: 497478-499331 bp Feature: domain Description: PRK05658 Location: 497490-499329 bp Feature: domain Description: PRK05658 Location: 497490-49932 9 bp Feature: gene Location: 515588-516802 bp Feature: domain Description: PRK10770 Location: 515600-516794 bp Feature: domain Description: PRK10770 Location: 515600-516794 bp Feature: gene Location: 516861-519671 bp Feature: domain Description: LptD Location: 517056-519657 bp Feature: domain Description: LptD Location: 517056-519657 bp Feature: gene Location: 519804-521516 bp Feature: domain Description: RVT_N Location: 519861-520104 bp Feature: domain Description: RVT_N Location: 519861-52 0104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520149-520785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 0149-52 0785 bp Feature: domain Description: YkfC Location: 520992-521145 bp Feature: domain Description: YkfC Location: 52 0992 -52 1145 bp Feature: domain Description: HNH Note: nucleases Location: 521322-521460 bp Feature: domain Description: HNH Note: nucleases Location: 52 132 2 -52 1460 bp Feature: gene Location: 522788-523804 bp Feature: domain Description: COG3178 Location: 522791-523790 bp Feature: domain Description: COG3178 Location: 52 2 791-52 3790 bp Feature: gene Location: 523801-524475 bp Feature: domain Description: NTP_transferase_like_1 Location: 523807-524446 bp Feature: domain Description: NTP_transferase_like_1 Location: 52 3807-52 4446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RXAS01000009.1 (306124 bp)
Overview 1 RT 1: 282492-286647 bp Neighborhood of RT #1 [282492, 286647] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 282492-283319 bp Feature: domain Description: ABC_phnC Location: 282522-283236 bp Feature: domain Description: ABC_phnC Location: 282522-283 23 6 bp Feature: gene Location: 283662-284117 bp Feature: domain Description: DUF772 Location: 283812-283944 bp Feature: domain Description: DUF772 Location: 283 812-283 944 bp Feature: gene Location: 284468-285736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284681-285338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284681-2853 3 8 bp Feature: domain Description: GIIM Note: maturase Location: 285416-285638 bp Feature: domain Description: GIIM Note: maturase Location: 285416-28563 8 bp Feature: gene Location: 285886-286284 bp Feature: gene Location: 286468-286647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT