myRT

myRT report for GCA_003974785.1_ASM397478v1

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Seq: RXBD01000031.1 (84605 bp)
Overview 1 RT 1: 3995-7344 bp Neighborhood of RT #1 [3995, 7475] RVT-GII GIIM DUF772 DUF772 Feature: gene Location: 3995-4174 bp Feature: gene Location: 4358-4756 bp Feature: gene Location: 4906-6174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5119-5776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 1 9-5776 bp Feature: domain Description: GIIM Note: maturase Location: 5854-6076 bp Feature: domain Description: GIIM Note: maturase Location: 5854-6076 bp Feature: gene Location: 6563-7195 bp Feature: domain Description: DUF772 Location: 6704-6899 bp Feature: domain Description: DUF772 Location: 6704-6899 bp Feature: gene Location: 7062-7475 bp Feature: domain Description: DUF772 Location: 7212-7344 bp Feature: domain Description: DUF772 Location: 721 2-7344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RXBD01000028.1 (71642 bp)
Overview 1 RT 1: 35770-42973 bp Neighborhood of RT #1 [35770, 42993] Porin_O_P RVT-GII GIIM Hydantoinase_B HyuA Feature: gene Location: 35770-36948 bp Feature: domain Description: Porin_O_P Location: 35995-36832 bp Feature: domain Description: Porin_O_P Location: 35995-36832 bp Feature: gene Location: 37129-37638 bp Feature: gene Location: 37613-38821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37805-38420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37805-3842 0 bp Feature: domain Description: GIIM Note: maturase Location: 38474-38702 bp Feature: domain Description: GIIM Note: maturase Location: 38474-38702 bp Feature: gene Location: 39122-40867 bp Feature: domain Description: Hydantoinase_B Location: 39137-40721 bp Feature: domain Description: Hydantoinase_B Location: 39137-4072 1 bp Feature: gene Location: 40903-42993 bp Feature: domain Description: HyuA Location: 40918-42973 bp Feature: domain Description: HyuA Location: 40918-42 973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RXBD01000035.1 (51094 bp)
Overview 1 RT 1: 15241-23432 bp 2 RT 2: 39696-49993 bp Neighborhood of RT #1 [15241, 23440] COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [39696, 50004] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 15241-16257 bp Feature: domain Description: COG3178 Location: 15244-16243 bp Feature: domain Description: COG3 178 Location: 15244-16243 bp Feature: gene Location: 16554-16688 bp Feature: gene Location: 17530-19242 bp Feature: domain Description: RVT_N Location: 17587-17830 bp Feature: domain Description: RVT_N Location: 17587-1783 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17875-18511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17875-18511 bp Feature: domain Description: YkfC Location: 18721-18871 bp Feature: domain Description: YkfC Location: 18721-18871 bp Feature: domain Description: HNH Note: nucleases Location: 19048-19186 bp Feature: domain Description: HNH Note: nucleases Location: 19048-19186 bp Feature: gene Location: 19375-22167 bp Feature: domain Description: LptD Location: 19570-22153 bp Feature: domain Description: LptD Location: 19570-22153 bp Feature: gene Location: 22226-23440 bp Feature: domain Description: PRK10770 Location: 22238-23432 bp Feature: domain Description: PRK10770 Location: 2223 8-23 43 2 bp Feature: gene Location: 39696-41549 bp Feature: domain Description: PRK05658 Location: 39708-41547 bp Feature: domain Description: PRK05658 Location: 3 9708-41547 bp Feature: gene Location: 41656-45393 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 41764-42421 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 41764-42421 bp Feature: domain Description: PRK09776 Location: 42634-43105 bp Feature: domain Description: PRK09776 Location: 4263 4-43 105 bp Feature: domain Description: PAS Location: 43177-43687 bp Feature: domain Description: PAS Location: 43 177-43 687 bp Feature: domain Description: PRK10060 Location: 43696-45343 bp Feature: domain Description: PRK10060 Location: 43 696-453 43 bp Feature: gene Location: 46474-48159 bp Feature: domain Description: RVT_N Location: 46531-46771 bp Feature: domain Description: RVT_N Location: 4653 1-46771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46819-47455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46819-47455 bp Feature: domain Description: GIIM Note: maturase Location: 47509-47740 bp Feature: domain Description: GIIM Note: maturase Location: 47509-47740 bp Feature: domain Description: HNH Note: nucleases Location: 47992-48130 bp Feature: domain Description: HNH Note: nucleases Location: 47992-4813 0 bp Feature: gene Location: 48487-48624 bp Feature: gene Location: 48883-50004 bp Feature: domain Description: COG3177 Location: 48901-49993 bp Feature: domain Description: COG3 177 Location: 48901-49993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RXBD01000021.1 (122708 bp)
Overview 1 RT 1: 20335-26045 bp Neighborhood of RT #1 [20335, 26074] Nnt1 YbaY RVT_N RVT-GII GIIM HNHc TIGR00244 ribD Feature: gene Location: 20335-20997 bp Feature: domain Description: Nnt1 Location: 20338-20806 bp Feature: domain Description: Nnt1 Location: 20338-20806 bp Feature: gene Location: 20994-21464 bp Feature: domain Description: YbaY Location: 20997-21459 bp Feature: domain Description: YbaY Location: 20997-214 59 bp Feature: gene Location: 22689-24395 bp Feature: domain Description: RVT_N Location: 22746-22983 bp Feature: domain Description: RVT_N Location: 2274 6-22983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23034-23670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23034 -23670 bp Feature: domain Description: GIIM Note: maturase Location: 23721-23955 bp Feature: domain Description: GIIM Note: maturase Location: 23721-23955 bp Feature: domain Description: HNHc Note: nucleases Location: 24174-24339 bp Feature: domain Description: HNHc Note: nucleases Location: 24 174 -24 339 bp Feature: gene Location: 24492-24956 bp Feature: domain Description: TIGR00244 Location: 24495-24933 bp Feature: domain Description: TIGR0024 4 Location: 24 4 95-24 933 bp Feature: gene Location: 24953-26074 bp Feature: domain Description: ribD Location: 24968-26045 bp Feature: domain Description: ribD Location: 24 968-2604 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RXBD01000034.1 (66031 bp)
Overview 1 RT 1: 3-3093 bp 2 RT 2: 7818-12842 bp Neighborhood of RT #1 [3, 3107] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM DUF3577 DUF3275 Neighborhood of RT #2 [7818, 13006] DEXHc_Snf RVT_N RVT-GII GIIM HNHc HNHc HepA SF2_C_SNF Feature: gene Location: 3-275 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6-126 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6-126 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 147-255 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 147-25 5 bp Feature: gene Location: 309-1484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1032 bp Feature: domain Description: GIIM Note: maturase Location: 1089-1302 bp Feature: domain Description: GIIM Note: maturase Location: 1089-1302 bp Feature: gene Location: 1891-2439 bp Feature: domain Description: DUF3577 Location: 1903-2287 bp Feature: domain Description: DUF35 77 Location: 1903-2287 bp Feature: gene Location: 2496-3107 bp Feature: domain Description: DUF3275 Location: 2502-3093 bp Feature: domain Description: DUF3275 Location: 25 02-3093 bp Feature: gene Location: 7818-8129 bp Feature: gene Location: 8232-9281 bp Feature: domain Description: DEXHc_Snf Location: 8448-8700 bp Feature: domain Description: DEXHc_Snf Location: 8448-8700 bp Feature: gene Location: 9664-11382 bp Feature: domain Description: RVT_N Location: 9721-9958 bp Feature: domain Description: RVT_N Location: 9721-995 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10009-10660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10009-10660 bp Feature: domain Description: GIIM Note: maturase Location: 10714-10945 bp Feature: domain Description: GIIM Note: maturase Location: 10714-10945 bp Feature: domain Description: HNHc Note: nucleases Location: 11179-11335 bp Feature: domain Description: HNHc Note: nucleases Location: 11179-11335 bp Feature: gene Location: 11434-11679 bp Feature: domain Description: HNHc Note: nucleases Location: 11476-11632 bp Feature: domain Description: HNHc Note: nucleases Location: 11476-11632 bp Feature: gene Location: 11747-13006 bp Feature: domain Description: HepA Location: 11765-11900 bp Feature: domain Description: HepA Location: 11765 -11900 bp Feature: domain Description: SF2_C_SNF Location: 12458-12842 bp Feature: domain Description: SF2_C_SNF Location: 1245 8-12842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RXBD01000010.1 (223707 bp)
Overview 1 RT 1: 3-4736 bp Neighborhood of RT #1 [3, 4744] Tra8 RVT_N RVT-GII YkfC HNHc COG3450 PRK13360 Feature: gene Location: 3-242 bp Feature: domain Description: Tra8 Location: 6-213 bp Feature: domain Description: Tra8 Location: 6 -213 bp Feature: gene Location: 1077-2783 bp Feature: domain Description: RVT_N Location: 1134-1374 bp Feature: domain Description: RVT_N Location: 1134-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1422-2058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1422-2058 bp Feature: domain Description: YkfC Location: 2280-2424 bp Feature: domain Description: YkfC Location: 2280-2424 bp Feature: domain Description: HNHc Note: nucleases Location: 2553-2727 bp Feature: domain Description: HNHc Note: nucleases Location: 2553-2727 bp Feature: gene Location: 2988-3350 bp Feature: domain Description: COG3450 Location: 2991-3336 bp Feature: domain Description: COG3450 Location: 2991-3336 bp Feature: gene Location: 3416-4744 bp Feature: domain Description: PRK13360 Location: 3422-4736 bp Feature: domain Description: PRK1336 0 Location: 3422-4736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT