myRT

myRT report for GCA_003974945.1_ASM397494v1

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Seq: RXBP01000020.1 (114201 bp)
Overview 1 RT 1: 110254-114043 bp Neighborhood of RT #1 [110254, 114090] DEXHc_Snf RVT_N RVT-GII GIIM HNHc Feature: gene Location: 110254-110583 bp Feature: gene Location: 110720-111775 bp Feature: domain Description: DEXHc_Snf Location: 110939-111197 bp Feature: domain Description: DEXHc_Snf Location: 1 1 0939-1 1 1 1 97 bp Feature: gene Location: 112372-114090 bp Feature: domain Description: RVT_N Location: 112429-112666 bp Feature: domain Description: RVT_N Location: 1 1 2429-1 1 2666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112717-113368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 271 7-1 1 3368 bp Feature: domain Description: GIIM Note: maturase Location: 113422-113653 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 3422-1 1 3653 bp Feature: domain Description: HNHc Note: nucleases Location: 113887-114043 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 3887-1 1 4043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXHc_Snf (cd17919), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: RXBP01000010.1 (304184 bp)
Overview 1 RT 1: 244067-252899 bp Neighborhood of RT #1 [244067, 252928] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 244067-245281 bp Feature: domain Description: PRK10770 Location: 244079-245273 bp Feature: domain Description: PRK10770 Location: 2 44079-2 452 73 bp Feature: gene Location: 245340-248123 bp Feature: domain Description: LptD Location: 245535-248109 bp Feature: domain Description: LptD Location: 2 45535-2 48109 bp Feature: gene Location: 248256-249968 bp Feature: domain Description: RVT_N Location: 248313-248556 bp Feature: domain Description: RVT_N Location: 2 48313-2 48556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248601-249237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 48601-2 492 37 bp Feature: domain Description: YkfC Location: 249447-249597 bp Feature: domain Description: YkfC Location: 2 49447-2 49597 bp Feature: domain Description: HNH Note: nucleases Location: 249774-249912 bp Feature: domain Description: HNH Note: nucleases Location: 2 49774-2 49912 bp Feature: gene Location: 251241-252257 bp Feature: domain Description: COG3178 Location: 251244-252243 bp Feature: domain Description: COG3178 Location: 2 512 44-2 52 2 43 bp Feature: gene Location: 252254-252928 bp Feature: domain Description: NTP_transferase_like_1 Location: 252260-252899 bp Feature: domain Description: NTP_transferase_like_1 Location: 2 52 2 60-2 52 899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: RXBP01000001.1 (865624 bp)
Overview 1 RT 1: 408416-415109 bp Neighborhood of RT #1 [408416, 415129] IV_pilus_PilQ DEAH_box_HrpB RVT-UG15 PBP2_HisK Feature: gene Location: 408416-409030 bp Feature: domain Description: IV_pilus_PilQ Location: 408806-409016 bp Feature: domain Description: IV_pilus_PilQ Location: 408806-409016 bp Feature: gene Location: 409345-411867 bp Feature: domain Description: DEAH_box_HrpB Location: 409357-411862 bp Feature: domain Description: DEAH_box_HrpB Location: 4093 57-411862 bp Feature: gene Location: 411978-413279 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 412083-412497 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 412083 -412497 bp Feature: gene Location: 413964-414371 bp Feature: gene Location: 414395-415129 bp Feature: domain Description: PBP2_HisK Location: 414497-415109 bp Feature: domain Description: PBP2_HisK Location: 414497-415109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IV_pilus_PilQ (TIGR02515), DEAH_box_HrpB (TIGR01970), RVT-UG15, PBP2_HisK (cd13704)

Seq: RXBP01000018.1 (149100 bp)
Overview 1 RT 1: 65509-68510 bp Neighborhood of RT #1 [65509, 68510] Avd_like RVT-DGRs Feature: gene Location: 65509-65865 bp Feature: domain Description: Avd_like Location: 65536-65839 bp Feature: domain Description: Avd_like Location: 65536-65839 bp Feature: gene Location: 65878-66096 bp Feature: gene Location: 66138-67247 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 66315-66999 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 66315-66999 bp Feature: gene Location: 67692-68069 bp Feature: gene Location: 68286-68510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs