myRT

myRT report for GCA_003975405.1_ASM397540v1

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Seq: RXDF01000021.1 (58867 bp)
Overview 1 RT 1: 243-9081 bp Neighborhood of RT #1 [243, 9110] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 243-1457 bp Feature: domain Description: PRK10770 Location: 255-1449 bp Feature: domain Description: PRK1 0770 Location: 255-1 449 bp Feature: gene Location: 1516-4305 bp Feature: domain Description: LptD Location: 1711-4291 bp Feature: domain Description: LptD Location: 1 71 1 -4291 bp Feature: gene Location: 4438-6150 bp Feature: domain Description: RVT_N Location: 4495-4738 bp Feature: domain Description: RVT_N Location: 4495-4738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4783-5419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4783-541 9 bp Feature: domain Description: YkfC Location: 5629-5779 bp Feature: domain Description: YkfC Location: 5629-5779 bp Feature: domain Description: HNH Note: nucleases Location: 5956-6094 bp Feature: domain Description: HNH Note: nucleases Location: 5956-6094 bp Feature: gene Location: 7423-8439 bp Feature: domain Description: COG3178 Location: 7426-8425 bp Feature: domain Description: COG31 78 Location: 7426-8425 bp Feature: gene Location: 8436-9110 bp Feature: domain Description: NTP_transferase_like_1 Location: 8442-9081 bp Feature: domain Description: NTP_transferase_like_1 Location: 8442-9081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: RXDF01000019.1 (68533 bp)
Overview 1 RT 1: 31193-33345 bp Neighborhood of RT #1 [31193, 33878] HipB RVT-UG17 Feature: gene Location: 31193-31474 bp Feature: domain Description: HipB Location: 31214-31448 bp Feature: domain Description: HipB Location: 312 14-31448 bp Feature: gene Location: 31560-31985 bp Feature: gene Location: 32514-33878 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 32742-33345 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 32 742 -33345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-UG17

Seq: RXDF01000007.1 (386487 bp)
Overview 1 RT 1: 380659-386188 bp Neighborhood of RT #1 [380659, 386484] CHD CHD RVT-GII GIIM DUF772 Feature: gene Location: 380659-382203 bp Feature: domain Description: CHD Location: 380875-381289 bp Feature: domain Description: CHD Location: 3 80875-3 81289 bp Feature: domain Description: CHD Location: 381517-382006 bp Feature: domain Description: CHD Location: 3 81517-3 82006 bp Feature: gene Location: 383287-383466 bp Feature: gene Location: 384198-385466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384411-385068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 84411-3 85068 bp Feature: domain Description: GIIM Note: maturase Location: 385146-385368 bp Feature: domain Description: GIIM Note: maturase Location: 3 85146-3 853 68 bp Feature: gene Location: 385855-386484 bp Feature: domain Description: DUF772 Location: 385993-386188 bp Feature: domain Description: DUF772 Location: 3 85993 -3 86188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)