myRT

myRT report for GCA_003976125.1_ASM397612v1

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Seq: RXCW01000021.1 (139028 bp)
Overview 1 RT 1: 128297-134981 bp Neighborhood of RT #1 [128297, 135064] CHD CHD RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 128297-129841 bp Feature: domain Description: CHD Location: 128513-128927 bp Feature: domain Description: CHD Location: 1 2851 3-1 28927 bp Feature: domain Description: CHD Location: 129155-129644 bp Feature: domain Description: CHD Location: 1 291 55-1 29644 bp Feature: gene Location: 130925-131104 bp Feature: gene Location: 131836-133104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132049-132706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 32049-1 32706 bp Feature: domain Description: GIIM Note: maturase Location: 132784-133006 bp Feature: domain Description: GIIM Note: maturase Location: 1 32784-1 33006 bp Feature: gene Location: 133493-134125 bp Feature: domain Description: DUF772 Location: 133634-133829 bp Feature: domain Description: DUF772 Location: 1 33634-1 33829 bp Feature: gene Location: 134237-135064 bp Feature: domain Description: ABC_phnC Location: 134267-134981 bp Feature: domain Description: ABC_phnC Location: 1 34267-1 34981 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: RXCW01000014.1 (197073 bp)
Overview 1 RT 1: 189531-192856 bp Neighborhood of RT #1 [189531, 192906] PRK02106 YciA RVT-GII GIIM HNH Feature: gene Location: 189531-191216 bp Feature: domain Description: PRK02106 Location: 189537-191199 bp Feature: domain Description: PRK02 106 Location: 189537-191199 bp Feature: gene Location: 191262-191666 bp Feature: domain Description: YciA Location: 191280-191655 bp Feature: domain Description: YciA Location: 1912 80-191655 bp Feature: gene Location: 191842-192906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191845-192421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191845-192 42 1 bp Feature: domain Description: GIIM Note: maturase Location: 192472-192679 bp Feature: domain Description: GIIM Note: maturase Location: 192 472 -192 679 bp Feature: domain Description: HNH Note: nucleases Location: 192718-192856 bp Feature: domain Description: HNH Note: nucleases Location: 192 718-192 856 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: RXCW01000015.1 (180035 bp)
Overview 1 RT 1: 1-2834 bp 2 RT 2: 49675-55408 bp Neighborhood of RT #1 [1, 2860] IS5 RVT-GII GIIM IS5 IS5 Neighborhood of RT #2 [49675, 55408] SF2_C_SNF RVT_N RVT-GII GIIM HNHc DEXHc_Snf Feature: gene Location: 1-324 bp Feature: domain Description: IS5 Location: 4-301 bp Feature: domain Description: IS5 Location: 4-3 01 bp Feature: gene Location: 819-2072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032-1689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 2-1689 bp Feature: domain Description: GIIM Note: maturase Location: 1767-1989 bp Feature: domain Description: GIIM Note: maturase Location: 1767-1989 bp Feature: gene Location: 2158-2499 bp Feature: domain Description: IS5 Location: 2161-2449 bp Feature: domain Description: IS5 Location: 2161-2449 bp Feature: gene Location: 2492-2860 bp Feature: domain Description: IS5 Location: 2501-2834 bp Feature: domain Description: IS5 Location: 2501-283 4 bp Feature: gene Location: 49675-50211 bp Feature: gene Location: 50270-51430 bp Feature: domain Description: SF2_C_SNF Location: 50888-51266 bp Feature: domain Description: SF2_C_SNF Location: 50888-51266 bp Feature: gene Location: 51597-53315 bp Feature: domain Description: RVT_N Location: 51654-51891 bp Feature: domain Description: RVT_N Location: 51654-51891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51942-52593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51942-52593 bp Feature: domain Description: GIIM Note: maturase Location: 52647-52878 bp Feature: domain Description: GIIM Note: maturase Location: 52647-52878 bp Feature: domain Description: HNHc Note: nucleases Location: 53112-53268 bp Feature: domain Description: HNHc Note: nucleases Location: 53 112-53 268 bp Feature: gene Location: 53912-54967 bp Feature: domain Description: DEXHc_Snf Location: 54131-54392 bp Feature: domain Description: DEXHc_Snf Location: 5413 1-543 92 bp Feature: gene Location: 55103-55408 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: RXCW01000008.1 (257983 bp)
Overview 1 RT 1: 304-4086 bp Neighborhood of RT #1 [304, 4130] RVT_N RVT-GII GIIM HNHc KOG0389 SF2_C_SNF resist_ArsH Feature: gene Location: 304-2022 bp Feature: domain Description: RVT_N Location: 361-598 bp Feature: domain Description: RVT_N Location: 361-598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 649-1300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 9-1300 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1585 bp Feature: domain Description: GIIM Note: maturase Location: 1354 -1585 bp Feature: domain Description: HNHc Note: nucleases Location: 1819-1975 bp Feature: domain Description: HNHc Note: nucleases Location: 1819-1975 bp Feature: gene Location: 2090-3349 bp Feature: domain Description: KOG0389 Location: 2120-2240 bp Feature: domain Description: KOG0389 Location: 2120-224 0 bp Feature: domain Description: SF2_C_SNF Location: 2789-3185 bp Feature: domain Description: SF2_C_SNF Location: 2789-3185 bp Feature: gene Location: 3408-4130 bp Feature: domain Description: resist_ArsH Location: 3432-4086 bp Feature: domain Description: resist_ArsH Location: 34 32-4 086 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: RXCW01000001.1 (692189 bp)
Overview 1 RT 1: 387756-398059 bp 2 RT 2: 414318-423176 bp Neighborhood of RT #1 [387756, 398061] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [414318, 423205] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 387756-388877 bp Feature: domain Description: COG3177 Location: 387774-388866 bp Feature: domain Description: COG3177 Location: 387774-388866 bp Feature: gene Location: 389598-391283 bp Feature: domain Description: RVT_N Location: 389655-389895 bp Feature: domain Description: RVT_N Location: 38965 5 -389895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389943-390579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389943-3905 79 bp Feature: domain Description: GIIM Note: maturase Location: 390633-390864 bp Feature: domain Description: GIIM Note: maturase Location: 390633-390864 bp Feature: domain Description: HNH Note: nucleases Location: 391116-391254 bp Feature: domain Description: HNH Note: nucleases Location: 391116-39125 4 bp Feature: gene Location: 392364-396101 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 392472-393129 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 392472-393129 bp Feature: domain Description: PRK09776 Location: 393342-393813 bp Feature: domain Description: PRK09776 Location: 393342-393813 bp Feature: domain Description: PAS Location: 393858-394395 bp Feature: domain Description: PAS Location: 39385 8-394395 bp Feature: domain Description: PRK10060 Location: 394404-396051 bp Feature: domain Description: PRK10060 Location: 394404-39605 1 bp Feature: gene Location: 396208-398061 bp Feature: domain Description: PRK05658 Location: 396220-398059 bp Feature: domain Description: PRK05 65 8 Location: 396220-39805 9 bp Feature: gene Location: 414318-415532 bp Feature: domain Description: PRK10770 Location: 414330-415524 bp Feature: domain Description: PRK10770 Location: 414330-415 5 24 bp Feature: gene Location: 415591-418401 bp Feature: domain Description: LptD Location: 415786-418387 bp Feature: domain Description: LptD Location: 415 786-418387 bp Feature: gene Location: 418534-420246 bp Feature: domain Description: RVT_N Location: 418591-418834 bp Feature: domain Description: RVT_N Location: 4185 91-418834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418879-419512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418879-4195 12 bp Feature: domain Description: YkfC Location: 419725-419875 bp Feature: domain Description: YkfC Location: 419725 -419875 bp Feature: domain Description: HNH Note: nucleases Location: 420052-420190 bp Feature: domain Description: HNH Note: nucleases Location: 42005 2-420190 bp Feature: gene Location: 421518-422534 bp Feature: domain Description: COG3178 Location: 421521-422520 bp Feature: domain Description: COG3178 Location: 4215 21-4225 20 bp Feature: gene Location: 422531-423205 bp Feature: domain Description: NTP_transferase_like_1 Location: 422537-423176 bp Feature: domain Description: NTP_transferase_like_1 Location: 4225 37-423176 bp Sorry, your browser does not support inline SVG.
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