myRT

myRT report for GCA_003978655.1_ASM397865v1

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Seq: QNYT01000176.1 (4137 bp)
Overview 1 RT 1: 2-3956 bp Neighborhood of RT #1 [2, 4135] SapB RVT-GII Intron_maturas2 HNHc PRK05733 Feature: gene Location: 2-148 bp Feature: gene Location: 340-786 bp Feature: domain Description: SapB Location: 379-769 bp Feature: domain Description: SapB Location: 379-769 bp Feature: gene Location: 992-2896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1283-2117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 283-21 1 7 bp Feature: domain Description: Intron_maturas2 Location: 2225-2585 bp Feature: domain Description: Intron_maturas2 Location: 2225-2585 bp Feature: domain Description: HNHc Note: nucleases Location: 2675-2837 bp Feature: domain Description: HNHc Note: nucleases Location: 2675-2837 bp Feature: gene Location: 3518-4135 bp Feature: domain Description: PRK05733 Location: 3521-3956 bp Feature: domain Description: PRK05733 Location: 3521 -3956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SapB (smart00741), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK05733 (single-stranded DNA-binding protein; Provisional)

Seq: QNYT01000229.1 (35214 bp)
Overview 1 RT 1: 9082-12999 bp 2 RT 2: 23395-31929 bp Neighborhood of RT #1 [9082, 13439] IS5 RVT_N RVT-GII YkfC IS5 TauA Neighborhood of RT #2 [23395, 32321] SSL2 RVT-UG5 nitrilase AAA_22 rve Mu-transpos_C Feature: gene Location: 9082-9726 bp Feature: domain Description: IS5 Location: 9316-9451 bp Feature: domain Description: IS5 Location: 9316-9451 bp Feature: gene Location: 9779-10192 bp Feature: gene Location: 10233-11714 bp Feature: domain Description: RVT_N Location: 10308-10539 bp Feature: domain Description: RVT_N Location: 10308-10539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10596-11238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10596-112 38 bp Feature: domain Description: YkfC Location: 11319-11535 bp Feature: domain Description: YkfC Location: 11319-11535 bp Feature: gene Location: 11860-12096 bp Feature: domain Description: IS5 Location: 11866-12070 bp Feature: domain Description: IS5 Location: 11866-12 070 bp Feature: gene Location: 12453-13439 bp Feature: domain Description: TauA Location: 12717-12999 bp Feature: domain Description: TauA Location: 12 717-12 999 bp Feature: gene Location: 23395-23925 bp Feature: gene Location: 23919-25292 bp Feature: domain Description: SSL2 Location: 23925-25032 bp Feature: domain Description: SSL2 Location: 2 392 5-2 5032 bp Feature: gene Location: 25367-28564 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 25889-26393 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 5889-2 6393 bp Feature: domain Description: nitrilase Location: 27881-28475 bp Feature: domain Description: nitrilase Location: 2 7881-2 8475 bp Feature: gene Location: 28654-30249 bp Feature: domain Description: AAA_22 Location: 29026-29467 bp Feature: domain Description: AAA_2 2 Location: 2 902 6-2 9467 bp Feature: gene Location: 30261-32321 bp Feature: domain Description: rve Location: 31044-31452 bp Feature: domain Description: rve Location: 31044-31452 bp Feature: domain Description: Mu-transpos_C Location: 31740-31929 bp Feature: domain Description: Mu-transpos_C Location: 31740-3192 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), TauA (COG4521), SSL2 (COG1061), RVT-UG5, nitrilase (cl11424), AAA_22 (pfam13401), rve (pfam00665)
Mu-transpos_C (pfam09299)