myRT

myRT report for GCA_003978875.1_ASM397887v1

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Seq: QNXQ01000200.1 (4878 bp)
Overview 1 RT 1: 3-3870 bp Neighborhood of RT #1 [3, 4610] PTZ00368 Exo_endo_phos_2 RVT-GII Feature: gene Location: 3-182 bp Feature: gene Location: 691-1590 bp Feature: domain Description: PTZ00368 Location: 967-1162 bp Feature: domain Description: PTZ00368 Location: 967-1 1 62 bp Feature: gene Location: 2259-4610 bp Feature: domain Description: Exo_endo_phos_2 Location: 2262-2496 bp Feature: domain Description: Exo_endo_phos_2 Location: 2262-2496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3483-3870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3483-3870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTZ00368 (universal minicircle sequence binding protein (UMSBP); Provisional), Exo_endo_phos_2 (pfam14529), RVT-GII

Seq: QNXQ01000078.1 (5055 bp)
Overview 1 RT 1: 1454-3061 bp Neighborhood of RT #1 [1454, 3061] RT_nLTR_like RVT-UNC Feature: gene Location: 1454-1792 bp Feature: domain Description: RT_nLTR_like Location: 1613-1787 bp Feature: domain Description: RT_nLTR_like Location: 1613-1787 bp Feature: gene Location: 1928-2065 bp Feature: gene Location: 2110-2271 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2143-2239 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2 143-2 2 39 bp Feature: gene Location: 2378-2632 bp Feature: gene Location: 2675-3061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_nLTR_like (cd01650), RVT-CRISPR/RVT-GII/RVT-UG11(RVT-UNC)

Seq: QNXQ01000100.1 (3544 bp)
Overview 1 RT 1: 250-3543 bp Neighborhood of RT #1 [250, 3543] R1-I-EN RVT-CRISPR-like Feature: gene Location: 250-3090 bp Feature: domain Description: R1-I-EN Location: 277-694 bp Feature: domain Description: R1-I-EN Location: 277-694 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1777-2389 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1777-23 89 bp Feature: gene Location: 3223-3543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-CRISPR