myRT

myRT report for GCA_003980975.1_ASM398097v1

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Seq: PNTC01000131.1 (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PNTC01000029.1 (55256 bp)
Overview 1 RT 1: 10-8162 bp Neighborhood of RT #1 [10, 8173] RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 10-285 bp Feature: gene Location: 712-2730 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1282-1732 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 12 82 -1732 bp Feature: gene Location: 3986-5446 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4361-4568 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4361-4568 bp Feature: domain Description: INT_P4_C Location: 4787-5324 bp Feature: domain Description: INT_P4_C Location: 4787-532 4 bp Feature: gene Location: 5591-8173 bp Feature: domain Description: mutS1 Location: 5642-8162 bp Feature: domain Description: mutS1 Location: 5642 -8162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)

Seq: PNTC01000062.1 (19818 bp)
Overview 1 RT 1: 16574-19126 bp Neighborhood of RT #1 [16574, 19164] Pox_D5 RVT-Retrons TIR_2 Feature: gene Location: 16574-16756 bp Feature: gene Location: 17143-17295 bp Feature: domain Description: Pox_D5 Location: 17146-17269 bp Feature: domain Description: Pox_D5 Location: 17146-17269 bp Feature: gene Location: 17533-19164 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17848-18445 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17848-18445 bp Feature: domain Description: TIR_2 Location: 18769-19126 bp Feature: domain Description: TIR_2 Location: 18769-19126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pox_D5 (pfam03288), RVT-Retrons, TIR_2 (pfam13676)