myRT

myRT report for GCA_003981345.1_ASM398134v1

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Seq: PNRY01000110.1 (2575 bp)
Overview 1 RT 1: 122-2572 bp Neighborhood of RT #1 [122, 2572] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 122-1789 bp Feature: domain Description: RVT_N Location: 170-407 bp Feature: domain Description: RVT_N Location: 1 70-407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-1 1 00 bp Feature: domain Description: GIIM Note: maturase Location: 1151-1385 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 51 -1 385 bp Feature: domain Description: HNHc Note: nucleases Location: 1595-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 1 595-1 754 bp Feature: gene Location: 2069-2251 bp Feature: gene Location: 2363-2572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: PNRY01000056.1 (29417 bp)
Overview 1 RT 1: 24082-28781 bp Neighborhood of RT #1 [24082, 29260] PRK09692 RVT-UG8 RVT-UG3 Feature: gene Location: 24082-24249 bp Feature: gene Location: 24709-25905 bp Feature: domain Description: PRK09692 Location: 24712-25894 bp Feature: domain Description: PRK09692 Location: 2 4712 -2 5894 bp Feature: gene Location: 26053-28005 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 26581-27034 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 6581-2 7034 bp Feature: gene Location: 27998-29260 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 28283-28781 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 82 83-2 8781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG8, RVT-UG3

Seq: PNRY01000063.1 (15883 bp)
Overview 1 RT 1: 3166-6877 bp Neighborhood of RT #1 [3166, 6877] LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 3166-4197 bp Feature: domain Description: LacI Location: 3208-3343 bp Feature: domain Description: LacI Location: 3 208-3 3 43 bp Feature: domain Description: PBP1_GntR Location: 3382-4192 bp Feature: domain Description: PBP1_GntR Location: 3 3 82-4192 bp Feature: gene Location: 4328-4546 bp Feature: gene Location: 4724-5575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4727-5135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4727-513 5 bp Feature: domain Description: GIIM Note: maturase Location: 5183-5405 bp Feature: domain Description: GIIM Note: maturase Location: 5183 -5405 bp Feature: gene Location: 5548-5982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5740-5956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5740-5956 bp Feature: gene Location: 6151-6348 bp Feature: gene Location: 6707-6877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388)